Pyrus x bretschneideri (Chinese white pear): 103958623
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Entry
103958623 CDS
T03446
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04142
Lysosome
pxb04144
Endocytosis
pxb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103958623
04142 Lysosome
103958623
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103958623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103958623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103958623
Membrane trafficking [BR:
pxb04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103958623
Exosome [BR:
pxb04147
]
Exosomal proteins
Proteins found in most exosomes
103958623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
103958623
NCBI-ProteinID:
XP_009369185
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEALTLPSVGINPQFITFTHVTMESDKYICVRETSPQNSIVIIDMSMPMQ
PLRRPITADSALMNPNSKILALKAGVQGTTQDHLQIFNIEMKAKLKSHLMPEQIVFWKWI
TPKMLGLVTQTTVYHWSIEGESEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNLQLFSVDQQRSQALEAHAASFAQYKVPGNENSSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFNDDFPVAMQMSHKYSLIYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTTEASSVGGFYAVNRRGQVLLATINEQTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYSEQLGVDQCMKLFEQFK
SYEGLYFFLGSFLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
GNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDEDLWGKVLDPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEDADVYHDLVKYLLMVRQKVREPKVDSELIYAYAKIDRLADI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFANRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLKEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDL
HDSFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIGLSKKDKLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDIVLELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQKEIKAKEQEDKEVIAQQNMYAQLLPLALPAPPIPGMSGGMGGGYA
PPPPMGGMPPMGMPPYGMPPMGSSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgaacgctccgatcaccatgaaggaggccctaacgcttccgagcgttggg
attaatccgcaattcataacgtttacacatgttactatggaatccgataagtacatatgc
gttcgggagacttcgcctcagaacagtattgttattatcgatatgagtatgccgatgcaa
cctctgaggaggcctatcaccgcggactctgcacttatgaatccgaattccaaaattctt
gccttgaaagctggagtccaaggtactactcaggatcatcttcaaatatttaacatcgag
atgaaagcaaaactgaaatcacatcttatgccggagcagattgttttctggaagtggata
accccaaagatgttgggtttagtcactcagactacagtataccactggtcaattgaaggt
gaatctgaacctgtaaaggtgtttgagcgaacagctaatctggctaacaatcagattata
aattaccgctgtgatccttccgagaagtggttggttttgattggaattgctcctggtgca
ccagagaggccacaattggtgaaaggaaatttgcaactcttctccgtggatcagcagcgc
agtcaagctcttgaagcacatgctgcatcatttgcccaatacaaggtcccagggaatgag
aattcttcaactcttatttcttttgccactaagaccctcaatgctggacagattacatca
aagttgcatgttattgagctcggtgcccagccagggaaaccatcttttacaaagaaacaa
gccgatcttttctttcctccagattttaatgatgatttcccagttgccatgcagatgtct
cacaagtacagcttgatttatgtaattacaaagcttgggctactatttgtgtatgattta
gagacagctagtgccgtttacagaaatagaattagtccggatccaattttcttgacaacg
gaggcttcatctgttggagggttttatgcggttaataggcggggccaggtgttgttggct
acaattaatgagcaaacaattgtgccttttgtcagcggccagctaaacaatttggagctt
gctgtcaatctggctaaaagaggaaatcttccaggtgctgagaatctggttgtccagcgt
tttcaagaactgtttgcccaaacgaagtacaaagaagctgctgagcttgctgcggagtcc
ccacaaggaattctccgcacacctgatactgttgctaaatttcagagtgttcctgtccaa
gctgggcaaacaccacctttgttgcagtactttgggacactcttgacaagagggaagctc
aacgcatttgaatcattggaattgtcacgtcttgtggtgaaccagaataagaagaacctt
ttggagaactggttggccgaggacaaactcgaatgcagtgaggaactgggagatcttgtg
aagactgtggataatgatctggctttgaaaatatatattaaagccagagcaactcccaaa
gttgttgcagcttttgctgagcgaagggagtttgacaaaatactgatctactcaaagcag
gttggctacacacctgactacctgttccttttgcaaacaattcttcgagcagatcctcag
ggtgctgttaattttgcattaatgatgtctcaaatggaaggtggttgtccagttgattac
aacactataacagatctcttccttcagaggaaccttattcgtgaggcaaccgcctttcta
ttggatgttttaaagccaaatcttccagagcatgcnttcctgcaaacaaaggtccttgag
atcaatttagtgacttttcctaatgtggccgatgctattttagccaatggaatgttcagt
cattatgaccgtcctcgtattgcccagctatgcgaaaaagctggtctttatgtgcgagct
ttgcaacattactcagagttgcctgatattaaacgtgtcatagtgaatacacatgcgata
gagccacagtcacttgtggagttttttggcactctgtcgaaagaatgggcgttggagtgc
atgaaagatcttttattggtcaacttaagaggaaaccttcagatcattgtgcaggttgct
aaggaatattctgagcagttgggtgttgatcaatgcatgaagctctttgaacagttcaag
tcatatgaagggttgtactttttccttggttcgtttttgagctcaagtgaggatcctgat
atccacttcaagtacattgaggcagctgctaaaactggacaaatcaaggaggtggagcga
gttacaagagaatcaaacttctatgacgctgagaagacaaagaacttcttaatggaagct
aagctccccgatgcacgtccattaattaatgtttgtgatcgttttggatttgttccagat
ctcacccactacttgtacacgaacaatatgcttcgttacattgaaggttacgtccagaag
gtgaaccctgggaatgctccattagttgtgggacagttgctagatgatgagtgccctgaa
gattttatcaaaggcttgattctttctgttcgttcattgcttccagtggagccccttgtg
gaggaatgtgagaagaggaatcgccttcgtttactcacacagttcttggagcatcttgtg
agtgagggaagccaagatgtacatgtgcacaatgctttgggtaaaatcatcattgatagt
ggcaataatccagagcacttccttaccacaaacccatattatgattcacgtgttgttggt
aaatattgtgagaaacgtgatcctaccctagctgttgttgcttaccgccgtggacaatgt
gacgatgaacttattaatgtcacaaataagaactcattgtttaaattgcaagcaaggtat
gtggttgagaggatggatgaagatctttgggggaaagttcttgatcctgagaatgagtac
agaagacagcttattgatcaagttgtttctactgccttgcccgagagcaagagcccggaa
caagtttctgcggctgttaaggctttcatgactgctgatttgcctcacgaattaattgag
cttcttgaaaagattgtgcttcaaaactctgccttcagtggaaactttaatctgcaaaac
ctgctaattttgacagccatcaaggcagatccgtctagagttatggattatattaatagg
ctagataattttgatggacctgcagttggggaagtagctgtggaagcccaattgtatgag
gaagcgtttgcaatcttcaagaagtttaacttgaatgtccaagctgttaatgtcttgttg
gataacatccgaagcattgatagggctgtggagtttgccttccgtgtggaggaagatgct
gtttggagccaggttgcaaaggctcaacttcgggagggtctagtgagcgatgctattgaa
tcatttatccgtgcggatgatgccacccaattcttggatgttattcgtgcttctgaggat
gcagatgtgtaccatgacttggtgaagtaccttctaatggttaggcaaaaggtcagagag
cccaaggtggacagtgagctcatttatgcatatgcaaagattgataggcttgctgacatc
gaagaatttattcttatgccaaatgtcgctaatctccaaaatgttggtgatcgcctatat
gacgaggctctctatgaagctgcaaagataatatatgccttcatatctaactgggccaag
ttggctgtcacacttgtgaagctcaaacaatttcaaggtgctgttgatgcagcacgaaaa
gctaacagttcaaagacatggaaggaggtttgctttgcttgtgttgatgctgaggagttc
cgcttagctcagatttgtggtctcaacattattatacaggtggatgacttggaagaggtc
agtgaatactaccagaatagaggatgcttcaatgagcttatatctctaatggagagtggt
cttgggttagaacgtgctcacatgggaatctttactgagttgggggttctatatgctaga
tatcgtccagagaaacttatggagcacatcaaattgttcgcaaatcgtctaaatatcccc
aagcttataagagcatgtgatgagcagcaacattggaaggagctgacctatctgtatatt
caatatgatgagtttgataatgctgcaactaccatcatgaatcattcccctgaagcctgg
gatcacatgcagttcaaagatgtggcagttaaagttgccaacgtggagctatattacaag
gctgtgcacttctacttgaaagagcacccggatctcattaatgatcttctaaatgtgctc
gcgcttcgtgtagatcacacacgtgttgttgacatcatgcggaaggctggtcacctgctt
cttgtgaagccatacatggttgcagttcagagcaacaatgtctctgctgtgaacgaggct
ttgaatgagatttatgttgaggaggaagactatgaaagattgcgcgaatcaattgatttg
cacgatagctttgaccaaataggcctcgctcaaaagattgagaaacatgagcttctggaa
atgagacgggttgctgcgtatatttacaagaaagctggaaggtggaagcagtcgattgga
ttgtcaaagaaagacaaactttacaaagatgccatggagacagcctcacaatctggtgac
cgtgaactggccgaggagttgcttgtttacttcattgaacagggaaagaaagaatgcttt
gcatcgtgcctctttgtttgttacgatttgataaggccggacattgtccttgaacttgca
tggatgaacaacatgatcgactttgctttcccatatctgttacagtttatccgtgaatac
actggcaaagttgatgaactggttaaagacaaaattgaagcgcagaaggagatcaaggct
aaagaacaagaagataaagaagtaattgcacagcagaacatgtatgctcagttgctgcct
cttgctttgcctgcaccaccaattcctggtatgagcgggggtatgggaggagggtatgct
ccaccgccacctatgggaggaatgccaccgatgggcatgccgccttatggcatgccacca
atgggcagcagctactga
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integrated database retrieval system
