Pyrus x bretschneideri (Chinese white pear): 103958840
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Entry
103958840 CDS
T03446
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103958840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103958840
04121 Ubiquitin system [BR:
pxb04121
]
103958840
03036 Chromosome and associated proteins [BR:
pxb03036
]
103958840
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103958840
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103958840
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103958840
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103958840
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103958840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
PTCB-BRCT
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
PHD_NSD
zf-RING_5
zf-RING_6
zf-RING_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103958840
NCBI-ProteinID:
XP_009369430
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MADANPNPKCSDSSSTRLTMNPWVLHFQKLGLELKCPLCLNLLNRPTLLPCNHIFCNSCI
PSSSCPVCKAEVADRDLRPVPFMENIVAIYKSLDASFCANLLQPVSSDVRTILEQNPISP
FISFAGTIAKEPFDNDQVGNSNSGQSIYSSSAHERVWAPCSLNRSVADGVGKNGKLENCS
MPIDANGKVLDFARSGMGNPILQLPSSQIRAGGLQECMTVERGMNHAAQSLPNSPPSFGD
AKCSDNDSCGRPCEQISENSLVRRSISNIDDSRVGQKRHDSCATEIDGHLRKKIKYEPVS
ETYSELEHKFSTAPNESFTKRTICAFCQSSIISVVTGPMLHYSKERLVEGDEANASNVIH
VHRICFDWAPQVYFEGENVKRLKAEVLRGAKLKCTKCGLKGAALGCFVKSCRRSYHVTCA
IEISKCRWDKENFLLLCPAHSSTKFPSEKSNYGKPKICPPSNSVEAPNEVNQWIICPSGL
SSEEKLLLIKFADKIGATVSKTWRPDVTHVIAALDGDGAYVRTFKTCMAILAGRWILKID
WVKACMEATDHVNEEPYEVSLDNYGCCDGPKTGRLRATNNEPNLFNGLSFYFAGDFVLDR
KEDLQDLIIAAGGTVFNSSEEVRERSCLEQTASRTLVVYNLDPPEGCKLGEEVSILWQRS
NEAQDIAAKIGSQIIGHTWLLESIARCKLQPFVC
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcaaaccctaaccctaagtgcagcgacagtagcagtaccaggttgacgatg
aacccatgggttcttcattttcagaaactgggcctcgagctcaagtgcccgctctgcttg
aatttgcttaatcggccgacactacttccatgcaatcacattttctgcaattcctgcata
cccagttcgagttgccctgtttgtaaagctgaggttgcggatcgagatctcaggcctgtg
ccattcatggaaaacatagtagccatctataaaagcttggatgcgtctttctgcgccaat
ttgttgcagcccgtttcttctgatgttagaaccattttggagcaaaaccccatttcgcct
tttatcagttttgctggtacaattgctaaagaaccatttgacaatgaccaggttggtaat
tcaaacagtggacaatccatctattcgtcgagtgctcatgaacgagtttgggctccttgt
agtctgaatcgttctgttgctgatggagttggcaagaatggcaaattagaaaactgtagc
atgccaatagatgctaatggcaaggtattagattttgctagaagcggaatgggaaatccc
attttacagctaccaagttctcaaataagagctggtggacttcaagagtgcatgactgta
gaaagaggcatgaatcatgcagcacagtcattgcccaacagtcctccttcatttggtgat
gccaaatgttcagataatgatagctgtggtcggccctgtgagcaaatttcagaaaattct
ttggtcaggagatcgatcagcaacattgatgacagtagagtagggcagaaaaggcatgat
agttgtgcaactgaaattgatggtcatttaagaaagaaaataaagtatgagccagtttca
gaaacttattccgagctcgaacataagttcagtacagctcctaatgaatcattcacaaag
agaacaatttgtgcattttgccagtcttctataatctcagtggttacagggccaatgctg
cattattctaaagagagactggttgagggagatgaggcaaatgcttcaaatgttatacat
gttcacagaatatgctttgattgggcaccgcaagtgtattttgaaggtgaaaatgtaaag
agattgaaggcagaagtgttaaggggtgcgaagctaaaatgcaccaaatgtgggctaaag
ggagcagcattgggatgctttgtgaagtcctgccggagaagctatcacgttacctgtgca
attgaaatttctaaatgtcgttgggacaaggaaaactttctgctgctctgtccagctcat
agttcaactaaatttcccagtgagaagtcaaattatgggaagcccaaaatctgtccgccg
tctaacagtgtggaagctccaaatgaagtgaatcaatggatcatatgcccatccggtttg
tcttctgaagagaagcttcttttaatcaagtttgccgacaagattggtgcaactgtgtcc
aagacctggagaccagatgttacacatgtgattgcagccctggatggggatggtgcatat
gtgaggacattcaaaacttgcatggccattttggctggaagatggattctgaaaattgac
tgggtaaaagcatgcatggaagccacagatcatgtgaatgaagaaccatatgaagttagt
cttgataactatggatgctgtgatggcccaaaaactggcaggcttcgggcaacaaacaat
gagccaaatctctttaatggtttgagtttctattttgccggtgattttgtactggataga
aaggaagaccttcaagatttgatcattgcagcaggaggcacagttttcaacagctcagaa
gaagtgcgggaacgaagttgtcttgaacagactgcttcaaggacgctagttgtatacaac
ctcgacccaccagaaggatgtaagttgggggaagaagtttcgatcctttggcaacggtca
aatgaggcccaggatatagctgcaaaaattggatcacaaatcatcggtcacacatggctc
ttggaatcaattgcgagatgcaagttacagccttttgtctgttga
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