Pyrus x bretschneideri (Chinese white pear): 103959006
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Entry
103959006 CDS
T03446
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04142
Lysosome
pxb04144
Endocytosis
pxb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103959006
04142 Lysosome
103959006
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103959006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103959006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103959006
Membrane trafficking [BR:
pxb04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103959006
Exosome [BR:
pxb04147
]
Exosomal proteins
Proteins found in most exosomes
103959006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
103959006
NCBI-ProteinID:
XP_009369618
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MAAANAPMTMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQVQGTTQDHLQIFNIEMKAKMKSHQMPEQIVFWKWI
TPKMLGLVTQTSVYHWLIEGESEPTKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
VERPQLVKGNMQLFSVEQKRSQALEAHAASFATYKVPGNEHPSILISFASKSSNAGQVTS
KMHVIELGAQPGKPSYTKKQADLFFPPDFADDFPVSMQISEKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASTVGGFYAVNRRGQVLLATVNEQTIVPFVSGQLNNLGL
AVSLAKRGNLPGAEDLVVQRFQELFSQTKYKEAAELAAESPMGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLYLRALQHYTELPDIKRVIVNTHAI
DPQALVEFFGTLSVEWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDKCIKLFEQFK
SYEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKAKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
GNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARY
VVERMDDDLWAKVLDPENEYRRQLIDQVVSTALPESKSPEQVSSAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGVMAVEAQLYE
EAFAIFKKFNLNVDAVNVLLDNIQSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIHADDATHFLEVIRASEDADVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWGKLACTLVKLNQFQGAVDAARK
ANSSKTWKFVCFACVDAEEFRLAQICGLNIIIQVDDLEEVCEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFCTRLNIPKLIRACDEQQHWKELTYLYI
EYDEFDNAATTIMNHSPEAWDHMQFKDVIVKVASVELYYRAVHFYLEEHPDVINDVLNVI
ALRVDHTRVVDIMRKAGHIRLIKPYMVAVQSNNVAAVNEALNEIYMEEEDYDRLRESIDL
HDSFDQIGLAQKLEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNHYKDCMETCSQSGD
HELSEELLIYFIEQGKKECFAACLFVCYDMIRPDVALELAWMNNIIDFALPYLLQFIREY
TGKVDELIKDKIEAQNEVKAKEKEEKELVAQQNMYAQLLPALPAPPGMGGYAPPPMPPMP
PMGGMGMPPMPPFGMPQMGPSY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctaacgcccccatgacgatgaaagaggccctaacgttgcctagtattggg
atcaatccccaattcatcacgtttacgcatgtgactatggaatcggataagtacatttgt
gttagggagacatcgccgcagaatagcgtcgttatcatcgatatgagcatgcccatgcag
ccattgcgtcgacccattaccgccgactcggctttgatgaatcccaattccagaattctt
gctttaaaagctcaagttcaaggaacaactcaggaccatttacaaatatttaacattgaa
atgaaagcaaagatgaaatcacatcagatgcctgagcagattgtcttttggaagtggatt
actccaaagatgctgggtctggtcacacagacctcagtatatcattggttaattgaaggt
gaatccgagcctacaaaggtctttgagcggacggctaatttggcaaacaatcaaataatc
aactaccgttgtgatccttcggaaaagtggttggtcttaataggaattgctcctggttca
gtagagaggccacaacttgtcaaaggaaatatgcagcttttttctgtggaacagaaacgg
agtcaggctcttgaagcacatgctgcatcgtttgccacatataaagttcctgggaatgag
catccatcaattcttattagttttgcctcaaagtcctccaatgctggacaggttacatca
aagatgcatgtaattgagcttggtgcccagccaggaaaaccatcatatactaagaagcaa
gcagatttattctttcctccggattttgctgatgactttccagtatcaatgcagatatcg
gaaaagtatgggttgatatatgttatcacaaagcttggacttttatttgtatatgaccta
gagacagcaactgcagtttatagaaatcgaatcagtccagatcctatatttttgacagct
gaagcttcaactgttgggggtttttatgcagtcaataggcgaggccaggtcttacttgcc
actgtaaatgaacaaacaattgtaccttttgttagtggtcagttgaacaatttggggctt
gcagtgagtcttgcgaaaagaggaaaccttcctggtgccgaggacctggttgtccagcgg
ttccaagaactgttttctcagactaagtataaggaggctgcagagcttgctgcggaatct
ccaatgggaatactccgtactcctgatactgttgctaaatttcagagcgttcctgtgcaa
gctgggcaaaccccaccgttattgcagtattttggaactcttttaactagaggaaaactc
aatgcttatgaatcattggaactgtcacgtttagttgtaaatcagaacaaaaagaatctt
ttggagaattggctagcagaggacaagctagaatgtagtgaagagcttggagatcttgtg
aagacagtggataatgacctcgctttgaaaatatacatcaaagcccgggcaactcccaaa
gttgttgcagcatttgctgagagaagggaatttgacaagattttaatatactcaaagcag
gttggatatacacccgattatttgttccttctccaaacaattttgcgggcagatccccag
ggggctgttaattttgctctaatgatgtctcaaatggagggaggttgtcccattgactac
aataccatcaccgatctgttccttcagaggaacttgatccgtgaggcaacagcctttttg
ttggatgtgctgaagccgaatctacctgagcatggattcctacagacaaaggttttggaa
atcaatcttgtgacttttccaaatgttgccgatgctatattggccaatggtatgttcagt
cattacgatcgcccacgtattggtcaactttgtgaaaaagctggtttgtatttgcgtgcc
ctacagcactacactgagttgcctgatatcaagcgtgtaatcgtgaacacacatgcaatt
gaccctcaggctcttgtcgagttctttggaactctttctgtagaatgggctcttgagtgc
atgaaagatcttctgctggtcaatcttaggggcaatcttcagattattgtacagactgcc
aaagagtattctgagcaactgggtgtagataaatgcataaaattgtttgagcagttcaag
tcctatgaggggctgtacttcttcctaggcgcatatttgagctccagtgaggatcctgat
atccatttcaagtacattgaagcagctgcaaaaactggacagattaaggaggtggagcgt
gtgacacgggaatccaatttttatgaccctgaaaaagctaagaactttttaatggaagca
aagcttccagacgcacgtcctctgattaatgtctgtgatcgttttggctttgttccagat
ctcacccattatttgtatacgaacaatatgcttcgttacattgaaggttatgtccaaaag
gtcaatccaggaaatgctcctttagttgtagggcagctattggatgatgaatgccctgaa
gatttcattaaaggtcttattctatcagttcgttctcttctaccggttgagccccttgtc
gaggaatgcgaaaagaggaatcgtcttcgcttgctcacccaattcttggagcatcttgtg
agtgagggaagccaagatgtacatgtccacaatgctctgggtaaaatcatcatagatagc
ggcaacaatcctgagcattttctcacaactaacccatactatgattctcgtgttgttggt
aaatattgtgaaaaaagggatcctacccttgctgttgttgcataccgtagagggcaatgc
gatgatgaactcgttaacgttacaaataaaaattctttgttcaaactccaggccagatat
gttgtggaaagaatggatgatgatctctgggctaaggtccttgatcctgaaaatgaatat
agaaggcagctaatcgatcaagttgtatctactgccttgcctgaaagcaagagtcctgag
caagtatcatcagctgtaaaagcatttatgactgcagaccttccacacgagttgattgag
cttcttgaaaagatagtgcttcaaaattctgcttttagtgggaacttcaatttgcagaat
ctattgattctgactgccatcaaagctgatccatccagagtcatggactacatcaataga
ttagacaacttcgatggacctgcagttggagtaatggccgtagaagctcagttgtatgaa
gaagcatttgcaatcttcaagaagttcaatttgaatgttgatgcagtgaatgtcctgttg
gataacatacagagcattgaccgagctgtagagtttgcattccgggttgaagaagatgct
gtttggagccaggtggccaaggctcaactgcgagagggattagtgagtgatgccatcgag
tcattcatccatgcagatgatgccacccactttttggaggtcatacgtgcttctgaggat
gcagatgtatatcatgacttggtaagataccttctgatggtcaggcagaagaccaaggag
ccgaaggtggacagtgaacttatttatgcttatgctaagattgatcggcttggtgatatt
gaagagttcattcttatgccaaatgttgccaatctccaaaatgttggggatcgcttgttt
gatgaagccctatatgaagcagccaagattatatttgcattcatttctaactggggtaaa
ctagcatgcactcttgtgaagctaaatcagtttcaaggtgctgttgatgcagctcggaaa
gctaacagctcaaaaacgtggaagtttgtttgctttgcatgtgtggatgctgaggaattc
cgcttagctcagatttgtggactcaacatcattatccaggtggatgatctggaagaggtc
tgtgagtattaccagaacaggggatgctttaatgagcttattagtctcatggagagtggg
ctaggattggagcgtgcacatatgggcatctttacagaattaggagttttatatgcaaga
taccgtcctgagaagcttatggagcacattaaattattctgtacccgtctcaacattcct
aagcttattagagcttgtgatgaacagcagcactggaaagaattaacatacttgtatatc
gaatacgatgagtttgataatgctgcaactaccataatgaaccactcccctgaagcatgg
gaccacatgcaattcaaggatgttattgtcaaagttgcgagtgtcgaactctactatagg
gctgtgcacttctacttggaagaacatcctgatgttattaatgatgttcttaatgtgatt
gcgctgcgtgtggatcacaccagagtggtggatataatgagaaaggctggtcacatccgt
ctgataaaaccatacatggttgcagttcagagcaacaatgtagctgctgtgaatgaagct
ctaaatgaaatatacatggaggaggaagactatgacaggcttcgtgaatcaatagatttg
catgacagctttgatcagataggtcttgctcaaaagcttgagaaacatgagcttcttgag
atgagacgcgttgctgcatacatttacaagaaagctggtcgatggaagcaatccattgca
ttgtcaaagaaagacaatcattacaaagattgcatggagacgtgctcacagtctggtgat
catgaactttcggaggaactacttatctatttcattgagcagggaaagaaagagtgtttt
gctgcatgcctatttgtttgttatgatatgatccggccagatgttgctcttgagcttgcg
tggatgaacaatataattgattttgccttaccatacctcctgcagtttatccgagagtac
acaggcaaggtggatgaacttatcaaggacaaaattgaagctcaaaacgaggtgaaagcc
aaagagaaagaagagaaggaacttgttgctcagcagaatatgtatgctcagttgcttcct
gctttgcctgcaccaccgggaatgggaggttatgctccaccaccaatgccaccaatgcca
ccaatgggagggatgggaatgccgccaatgcccccctttggaatgccacaaatgggcccc
tcttactaa
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integrated database retrieval system
