Pyrus x bretschneideri (Chinese white pear): 103959417
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Entry
103959417 CDS
T03446
Name
(RefSeq) probable pectate lyase 8 isoform X2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103959417
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103959417
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
PmbA_TldD_1st
Motif
Other DBs
NCBI-GeneID:
103959417
NCBI-ProteinID:
XP_009370039
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAVFDSKKKWVGAFVTVLLMFCFAAAAVSEISRNRNGRTDKLQSSSDSSMAARVAEDDQG
FNKHAVEDPEEIASMVDMSIRNSTERRKLGYFSCGTGNPVDDCWRCDPNWHKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRAGTLRHAVIQNEPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGGCITIQYVTNIIIHGLHIHDCKPTGNALVRSSPSHFGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGNPTINSQG
NRYAAPTNPFAKEVTKRVETATTEWKNWNWRSEGDLLLNGAYFTPSGAGASGSYARASSL
GAKSSAMVGSITSGSGALPCRRGHPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgatagtaagaagaaatgggtcggtgcgttcgtgacggtgcttctcatg
ttctgctttgctgctgctgcagtgtctgagatctctcgcaacaggaatggacgaacagac
aagttgcagagctcgagcgactcgtcaatggcagccagagtggctgaggatgaccaagga
ttcaacaagcatgcagttgaagacccagaagagattgcttccatggttgacatgagtatc
cgaaacagcactgagaggaggaagctgggctacttctcctgtggaactggcaatccagtc
gatgactgctggcgatgtgatcccaactggcacaaaaaccgcaagcgccttgcagactgt
ggcattggttttggcaggaatgccattggtggtcgcgatggacgcttctatgttgtcacc
gaccctaatgatgatgaccccgttaaccccagggctggcactctccgccatgctgtcatc
cagaacgagcctctctggattgtgttcaagcgagacatggtgatacagttgaagcaggag
ctcatcatgaacagcttcaagaccattgatggacgcggagtcaatgttcacattgctaac
ggaggatgcatcacaatccaatatgttacaaatattatcattcacggcctccacatccac
gactgcaagcccacaggaaatgctttggtgaggagctcgccttctcactttgggtggcgg
acaatggctgatggcgatgctgtctccatcttcgggtcaagccatatttgggttgatcac
aattccctctccaactgcgctgacggtctagttgatgctgtcatgggctcaactgcaatt
accatttccaacaaccacatgacccaccacaatgaggtgatgctgctgggccacagtgat
agctacaccagagacaagcaaatgcaagtcacaattgcttacaaccactttggagaggga
cttatccaaagaatgcctaggtgcaggcacgggtatttccatgtcgtgaacaacgactac
actcactgggaaatgtatgccattggtggaagtggaaatcccaccatcaacagccaaggc
aacagatatgctgctccaaccaacccttttgcaaaggaggttaccaagagggttgagacg
gctaccactgaatggaagaactggaactggagatcagaaggagatctgctgctcaatggt
gcctacttcactccatctggagctggagcttcaggaagctacgccagagcctcgagcttg
ggagccaagtcatctgccatggttggatccataacttcaggttccggtgcacttccatgc
cgcagaggccacccctgctag
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