Pyrus x bretschneideri (Chinese white pear): 103959449
Help
Entry
103959449 CDS
T03446
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103959449
09122 Translation
03013 Nucleocytoplasmic transport
103959449
03015 mRNA surveillance pathway
103959449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103959449
03041 Spliceosome [BR:
pxb03041
]
103959449
03009 Ribosome biogenesis [BR:
pxb03009
]
103959449
03012 Translation factors [BR:
pxb03012
]
103959449
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103959449
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103959449
mRNA cycle factors
Stress granule specific factors
103959449
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103959449
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
90S particles
Helicases
103959449
Translation factors [BR:
pxb03012
]
Eukaryotic type
Initiation factors
eIF-4
103959449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA
AAA_19
TniB
Motif
Other DBs
NCBI-GeneID:
103959449
NCBI-ProteinID:
XP_009370068
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MAPFATSDGIEAIMSFDEMGLKDDVLRGIYEYGYDKPSAIQQRAVRHIIEGYDVIAQSQS
GTGKTSMMALTVCQLVDTSCREVQALILCPTRELAAQTEKVILAIGNHMNIQAHACIGGK
SVAEDIQKLEHGVHVVCGTPGRVHDMIKRRSLRTRAIKLLFLDESDEMLSRSFKDQIYNV
YRYLPPELQVCLISATLPQEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVLVEREEWK
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHADMPQKERDAITQEFR
AGNTRVLITTDVWARGLDVQHVSLVINYDLPNNREIYIHRIGRSGRYGRKGVAINFVRTN
DIKILRDIEQYYSTQIDEMPMNVGDLI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattcgcgacttctgatgggatagaggcgatcatgagcttcgatgagatgggg
ttgaaggatgatgtgctccgaggcatctacgaatatgggtatgacaagccctccgccatc
cagcaacgggcagtcaggcacattatcgagggttatgatgtcatagcccagtcccagtca
ggtaccggcaaaacctccatgatggccctcacagtttgccaactcgttgacacctcctgc
cgagaggttcaggccttgatattgtgtcccactagggaactggcggcacagacggagaag
gtgatattggcgattggaaatcacatgaacatacaagcgcatgcttgcatcggaggcaaa
agcgtggctgaggatattcaaaagcttgagcacggagttcatgtggtgtgtggaactcca
ggtagagtccatgacatgatcaagaggagaagtctgcgcactcgagccattaaattacta
ttcctcgacgaatctgatgaaatgttaagcagatcattcaaggatcagatttacaatgtc
tatagatatcttccacctgaactacaagtctgcttaatttccgctacgcttcctcaagaa
atcctggagatgacgagcaagtttatgacggaccctgtaaggatccttgtcaagcgtgat
gagttgactttggagggaatcaaacaatttttcgttttggttgaaagagaagaatggaag
tttgatacgctgtgcgatctctatgacactcttacaattacacaagctgttattttctgc
aacacaaagcgaaaggtggattggttgacagaaaagatgcggagtaataactttactgta
tcttccatgcatgcagacatgcctcaaaaggaaagagatgccattacccaagagtttcgt
gctggaaatactcgtgtcctgatcactactgatgtttgggctcggggcctcgatgttcag
catgtttccttggttatcaactatgatcttccaaacaatcgagagatatacattcatcgg
attggtcgttctggtcgttatgggcgcaagggtgtggccataaactttgtcagaaccaat
gatatcaagatcttaagagacatcgaacagtactacagtacccagattgacgaaatgccg
atgaacgttggtgatttgatatga
DBGET
integrated database retrieval system
