Pyrus x bretschneideri (Chinese white pear): 103959521
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Entry
103959521 CDS
T03446
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103959521
Transcription machinery [BR:
pxb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103959521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
103959521
NCBI-ProteinID:
XP_009370149
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MGFGFRLNLLKSGFPPQRSHWQTASSNSKLSSASVRGREGSFNSARLSFLSIISEEGETS
GKDTLKIYSCSSASPLILEDGFSDLEEIRFRRVPKSSSSNTIGNNQMPDSDFRSSKGLEA
CSAAHFSLLLKNLDALEETFANSDVLKLENEILLQLGRLGALQLFDAYLSRTLTSSSFFY
LSDIPTVPIEEDKMDKKVDNDRGKTIVRSGKKEERRSRKRASDNARVSSELLPPKTTWEG
FKPPTVSSAKRASNSRRRRLTIVLNEAELSTGVKVIANLERVKATLEKETGTVATLSCWA
EAAGVHEKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRGLGVAMDDLLQAGNLGLLQG
AERYDHSRGYRFSTYVRYWIKKSMSRLVARHARGIQIPFMLSKAINQIQKARKATYNSQM
KYPNDDEIAKITGLSLVRIRSASTCLRVVGSIDDKMWDSSAGTFMEFTADKSIKSPEESV
MRQHMKKDIHGLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLFDVSKEWIRKIEKKAL
TKLRDNETHRSLSHYLNN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggggtttggttttaggctgaacctcctcaagtctggcttcccacctcagcgttctcac
tggcaaactgcttcttctaattccaagctctcttctgcttctgttagaggcagggagggc
tctttcaactcagcaaggctgtcatttctgtcaattatttccgaggaaggtgagacttcc
ggtaaagatactctgaaaatctactcttgctcatctgcttccccactaatcttagaggat
ggcttctcagatttggaagagataagatttaggagggtgccaaagagtagttcatcaaat
acgattgggaataaccagatgcctgacagtgactttagatccagtaaaggcttagaagct
tgcagtgcagctcattttagtttgttactgaaaaatcttgatgctctggaggagactttt
gctaattcggatgtgttaaagttggaaaatgagatacttttgcagttaggaaggcttgga
gctctacagttatttgatgcctatctgtcaagaactcttacatcatcgagttttttttat
ttgtctgacatacctacggtacccattgaagaggataagatggataagaaagtagataat
gacagaggcaagactattgttcggtctgggaagaaggaagaacgaagatcaaggaaaaga
gcatcagataatgccagagtttcttctgaattattgcctcctaaaacaacttgggaaggt
tttaagccgcccactgtttcatcagcaaaaagagcatcaaattctcgaaggagaagactt
acaattgttctaaatgaggcagaactgtcaaccggggttaaggtgatcgccaacttggag
agagttaaggcaactttggaaaaggaaactggtaccgtagctaccttaagttgctgggcg
gaagcagctggagttcacgagaaggtgctgttacagaaattgcattttggttggtattgc
caggatgagcttataaggagcactcgctccttagtcctatacctagctagaagctataga
gggctaggagtagccatggatgatttactgcaggccggaaacttgggtctcctgcaaggt
gcagaaaggtatgatcactcgaggggttacagattctcaacctacgtccggtattggata
aagaaatcaatgtcaagattggtggcacggcatgctagggggatccaaattcctttcatg
ctaagcaaggcaataaatcagatacagaaagctcgcaaagccacttacaacagccaaatg
aaataccccaacgatgatgaaattgcaaagattacaggtctttctttggtgagaatcaga
tcagctagcacatgcttgagagttgtgggttcgatagatgacaagatgtgggatagctct
gctgggacatttatggaatttacagcggacaagtcaataaagagccctgaagaaagtgta
atgaggcaacacatgaaaaaagacattcatggtctgctgaagtgcttgaactcgaaggag
aggcaagtgttggtgctgcgatatggactaaacaactacgaccccaagtcacttgaggag
attggaaagcttttcgatgtgagcaaggagtggatacggaagatagaaaagaaagccctc
acaaagctaagggacaatgaaacacacagaagtttaagtcattacttgaataactag
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