Pyrus x bretschneideri (Chinese white pear): 103959807
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Entry
103959807 CDS
T03446
Name
(RefSeq) branchpoint-bridging protein-like
KO
K13095
splicing factor 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103959807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103959807
Spliceosome [BR:
pxb03041
]
Complex A
Other components
Complex A specific factors
103959807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_5
PHD_4
KH_PNO1_2nd
BRCT
RRM_7
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
103959807
NCBI-ProteinID:
XP_009370447
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MEAALPSNPNPPPPIESLDPHPPPPAETLASDSNGPPQPPPTETPPSDAQNPFPNPQAAT
ENGNSTDACKKLAITKPLLSENGLTNTNSGNERDGSGGEEETTSRRRRRSRWDPQPESEN
QSGGGETGSGTRKRKSRWADEEPKAIQLPDFMGGIEFDPEIQALNSRLLEISRMLSSGLP
LDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKERQEIIAQIIKRNPAFKPPADYR
PPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRSQQKR
DLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI
RDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQ
NFLAELGGTVPESATKQTAMLALGPGNSTSSNPPWANSTSSTSSASSHPGLGSTGVKPVK
DYDETNLYVGYLPPTLDDDGLIRLFSAFGDIVMAKVIRDRVTGASKGYGFVKYGDVQMAN
NAIASMNGYRLEQRTIAVRVAGKPPQPAGPPASAMPTYPVPQPVASFPSQQFTPGGPLGN
APPTSYAGTPVPWGPPVPPPYAPYAPPPPPPPGSTMYPPPMPGQHMSPYGARYPPPPGAP
PQPMTSSEAQHSYPPPGVQSEHNVSTQSLQTNLYGGSSAPMPPNGQHTYPAASYGYSSYY
NAVPPPPPPPGPVPGSTADQSQNIGNVPWATSAPVHPPASSVEKTTYGADAEYEKFMAEM
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgctcttccatcaaaccctaaccctcctcctccaatcgaatccctagatcct
catccccctcctcctgccgaaaccctagcctcagattcgaatggcccgcctcaaccgccg
cccactgaaaccccaccttccgatgctcaaaaccccttcccaaatccccaggccgctact
gagaacggtaattcgactgacgcctgcaagaagcttgctattacgaagccgctgttgtcg
gaaaacggattgaccaacaccaatagcggcaacgaaagggatggctcgggcggggaggag
gagacgaccagcaggcgccgccgccgcagccggtgggatcctcagcccgagtcggagaat
cagagtggtggtggggagacgggcagtgggacgaggaagaggaagtcgcggtgggcggat
gaggagccgaaggcgattcagctgccggatttcatgggaggtattgagtttgatccagaa
attcaagctttgaatagtaggttgcttgagattagtcgaatgctgtcttcgggtttgccc
ttagatgatcgtcccgaaggggctaggtctccttcgccggaacctatatatgataacatg
ggaattaggattaatactagagagttccgtgcccgtgaaaggttgaacaaagagaggcag
gaaattattgctcagattattaagaggaacccggcatttaagcccccggctgattacagg
ccacccaagcttcataagaagctttacataccgatgaaggaatatcccggatacaatttt
atcggacttatcattgggccaagaggtaatacgcagaagaggatggagaaagaaactggt
gcaaaaattgtcattaggggtaaaggttcggtgaaagaaggcaggtcgcaacagaagagg
gatttgaaacctgacccttccgagaacgaggacttgcatgttttggttgaggcagataca
caagacgctcttgatgctgcggctgggatggtggagaaactcttgcagcctgttgatgag
gtgttgaatgagcataagaggcaacaacttagggaacttgcggcattgaatgggacaata
agggatgaggagtattgtaggttgtgtggtgagccggggcaccgtcagtatgcttgtcca
tcacgtacttcgaccttcaagagcgatgttctttgtaagatatgtggtgatggtgggcat
ccaaccattgattgcccagtgaagggtacaactgggaagaaaatggatgatgagtatcag
aacttcttggctgagttgggggggacagttcctgaatccgcaactaagcagaccgctatg
ttggcacttggcccaggcaatagtacatcaagcaatcctccttgggctaacagtactagc
agcactagcagtgcatcatcacatccaggcttgggatcaactggagtcaagccggtcaag
gactatgacgagacaaacttgtacgttggatacttgccgcctacccttgatgacgatggt
ttaatccgattgttttcagcgtttggtgatattgtgatggccaaagttatcagggaccgg
gttaccggagcaagtaagggttatggttttgtgaagtatggagatgttcaaatggctaat
aatgcaattgcaagcatgaatggttatcgcctagagcagcgaaccattgctgtcagagtt
gccggcaagcctccgcagcctgctggacctccagcatcggcaatgcccacataccccgtt
ccccagcctgttgcttcctttccatcccagcagtttacccccggtggtcctcttgggaat
gcaccacctactagctatgcgggtactcctgttccatggggaccccctgttcctcctcct
tatgctccttatgctccgccgccaccacctcccccgggttcaaccatgtatcctcctccc
atgccgggtcaacatatgtctccttatggtgcacgataccctcctccccctggtgcacca
cctcaaccaatgacttcaagtgaagcacaacacagttatccccctccaggagttcaatct
gaacacaatgtctctacccaatctctacaaactaatctgtatggtggctcctcagcacca
atgccaccaaacggccaacacacttatcctgctgcttcatatggttactcatcttactac
aatgcagttccaccacctccacctccccccggccctgtacctggatcaactgcagaccaa
tctcagaacattggtaacgttccatgggccacgagtgctccagttcaccctcctgcttct
tctgtggaaaagacaacttatggtgcagatgcagagtatgagaagttcatggcagaaatg
aaatga
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