Pyrus x bretschneideri (Chinese white pear): 103959810
Help
Entry
103959810 CDS
T03446
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103959810
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
103959810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
EzrA
AAA_15
AAA_29
DUF3450
Sipho_Gp157
SbcC_Walker_B
Com_YlbF
AAA_21
NPV_P10
LRAT
ABC_tran
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
103959810
NCBI-ProteinID:
XP_009370452
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MGDPISGLRQRSGSGIVQRVRLENFMCHSSLQIELGDWVNFITGQNGSGKSAILTALCVA
FGSRAKGTQRASTLKDFIKTGCSNAVVQVELKNQGEDAFKPEIYGDIITVERRISGTTSA
TVLKDKQGRRVAARKEDLRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKA
TLLQQVEDLLQNIEQQLEKAGVVVDELEGSIRPIERELNELQEKIKSMEHVEEISQKAKQ
LKKKLAWSWVYDVDKQLQEQNLRIVKLKDRVPRCQAKIDEKIGQVVKLRECFTMKKSEID
QMMAKTSEIRRMKDELQQTLTLATKEKIGIGEEYSRKANQIQKLMNAVRSLQQQIEDTQE
QHAKHTQAEESAIEEKLKELQNEVSTVESMLTRLKEEESALSECIQQINNEIREINQMIQ
NIDKNRREISSVIRELRQNQTNKVTAFGGQQVIYLLQSIERHHQRFTSPPIGPIGAHLTL
NNGDVWGPAVEHAIGRLLNAFIVTNHKDSLLLRACAKEAKYNNVQIIIYDFSLPRLHIPP
HMLPQTEHPTTLSRVPSESHTVLNXXXXVLSENHTVLNVLVDRGDIERQVLVRDYDVGKT
VAFDQRISNLKEVVTLDGSRMFSRGSVQTVLPPNKRVRTGRLCSSYDDQISDLERQAKSV
EEEDKQCMRRKRNAEQNLQDLQEKLRNVKRRRAHADRDLASKRLALQDSAYAAEASTSPA
STVDELHQEISKKQEEIQEKKMLLQKFRERTDEAEAKTHDLKVSYEKLCESAKGDIDAFE
KAERELMETEENLASAEEEKAHYEGVMRNKVLRDIQEAEKEFQQLEHHREENCRKASILC
PESEIIAMGDWDGSTPEQLSALLTRLNQRLERESQRFTESIDDLRMSYKKKERKILERQK
KYRAYREKLHACQKALNLRRSKFERNANLLKRQLTWHFNTHLGRKGMSGKIKIDDRERTL
AIEVKMPQDASSSTVRDTRGLSGGERSFSTLCFTLSLHEMTEAPFRAMDEFDVFMDAVSR
KISLDTLVDFALVQGSQWILITPHDISMVKNGERIKKQQMAAPRS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccctatctccggcctccgccagcgttccgggtcgggcatcgtccaaagagtc
agattggagaacttcatgtgccacagtagcttgcagattgagctcggcgactgggtcaat
ttcatcaccggccaaaatggaagtggtaaaagtgcaatactgacagctctttgtgtggcc
tttgggtctcgagctaaaggcactcaaagggcgtcgacattgaaggatttcataaaaact
ggttgcagtaatgctgttgtccaagtggaactcaaaaatcaaggggaggatgcttttaag
cctgaaatatatggggacatcataacagtagagcgcaggatttctggaacgacaagcgcc
actgttttgaaggataaacaaggaagaagggttgctgctcgaaaagaggatcttcgagag
ctagtagaacattttaatattgatgtggagaatccttgtgttgtcatgagtcaagacaaa
agcagagagtttttgcattctgggaacgacaaagataaattcaagttcttttacaaggcc
acacttcttcagcaagttgaagatcttttgcaaaacattgaacaacagttggagaaagca
ggtgttgttgttgatgaattagagggctcaataagacctattgaaagggaacttaatgag
ttgcaagaaaagattaaaagcatggagcatgttgaagaaatatctcaaaaagcaaaacag
ttaaaaaagaaacttgcttggtcatgggtatatgatgtggacaagcaactccaggagcag
aatttgagaatagtcaagctgaaagatcgtgtgcctcgatgtcaagctaaaattgatgaa
aaaataggtcaagtggtgaaactgagagaatgcttcaccatgaagaaatctgaaattgat
cagatgatggcaaagacatcagaaattaggagaatgaaggacgaattacagcagacacta
acattggccacgaaagagaagattgggattggagaagaatatagccgcaaagctaaccag
atccagaagttgatgaatgctgttaggtctcttcagcaacagattgaggatacgcaggag
caacatgccaaacatacacaggcagaagaatctgcaatagaggaaaagctgaaagaactc
caaaatgaggtttctactgttgaatcaatgcttaccaggttgaaggaagaggagagtgcc
ttatcagaatgcatacaacagataaataatgaaatcagagagataaatcaaatgattcaa
aatattgacaagaatcgccgagagatctcaagtgttattcgtgagcttcgtcaaaaccaa
accaacaaggtgacagcatttggtggacagcaggtgatatacctcctacaatcgattgag
agacatcatcaaagattcacaagtcctcctattggtccaattggtgcccacctgactttg
aataatggtgatgtctggggccctgctgttgaacatgccattggaaggttgctcaatgca
ttcattgtaacgaatcataaagactctcttcttctgagagcatgtgcaaaagaagcaaag
tacaacaacgttcaaattatcatatatgacttttcattaccaaggttgcatatacctcct
cacatgcttccacaaacagagcacccaactactctttcccgtgttccttctgaaagtcat
actgttctaaatnnnnnnnnnngtgttctttctgaaaatcatactgttctaaatgttttg
gtagataggggagatattgaaaggcaagttcttgtacgagattatgacgtgggaaaaaca
gttgcttttgaccagaggatctcaaatttaaaggaggttgtcactttagatggtagtagg
atgttttctcgtggctctgtccagacagtactccctcccaataagagagttagaactggt
cgtctttgtagttcttacgatgatcaaattagtgatcttgaaaggcaagcgaaaagtgta
gaagaagaagataagcagtgcatgaggagaaaaagaaatgcagagcaaaaccttcaggat
cttcaagagaagctccgaaatgtgaagaggaggcgtgcacatgcggaccgtgatttggca
tctaagagactagcgcttcaagacagtgcatatgctgctgaagctagtacatcacctgca
tcaactgttgatgagcttcaccaagaaatctcaaaaaagcaagaggagattcaagaaaag
aaaatgttgctgcaaaagtttcgagagagaactgatgaagctgaagcaaagacccatgat
cttaaagtatcatatgagaaactatgtgagtcggcaaaaggagatattgatgcctttgag
aaagcagagagagaactgatggagactgaagaaaatctggcttctgcagaagaggagaaa
gctcattatgaaggtgtaatgaggaacaaggtacttcgcgatatccaagaagcagaaaag
gaatttcagcagcttgagcatcatcgtgaggagaattgtagaaaggcttctatcctttgt
cctgagagtgaaattatagctatgggtgattgggatggtagcaccccggaacagctcagc
gccctattaaccaggctgaatcagaggcttgagcgagagagccagagattcactgaatcc
attgatgacctccgaatgtcatataagaaaaaagaacgtaagattttagagagacagaaa
aagtacagagcttaccgagaaaagttacatgcatgccagaaagccctaaatttgagacgt
agcaagtttgaaagaaacgccaatcttttaaagcgccagttgacatggcattttaatacc
catctgggaaggaaggggatgagtgggaaaattaagattgatgacagggagaggaccctt
gctattgaggtaaagatgccccaggatgcatcgagcagcactgttcgcgacactagaggg
ctttcaggtggggagcgctccttttcaacgttgtgctttacattgtctcttcatgaaatg
acggaagccccatttagagcaatggacgagtttgatgttttcatggatgctgtaagccgg
aaaatcagcctagacactcttgtcgattttgcattggtgcaaggatcccaatggatactt
atcaccccacacgatatcagtatggtgaagaacggggagaggataaagaagcagcaaatg
gcagctcctcgctcttga
DBGET
integrated database retrieval system
