Pyrus x bretschneideri (Chinese white pear): 103959825
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Entry
103959825 CDS
T03446
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103959825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103959825
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103959825
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103959825
Multi subunit type E3
ERAD complex
103959825
LMBR1L-GP78-UBAC2 complex
103959825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-C3HC4_4
zf-RING_Vps41
E3_UbLigase_EDD
zf-HC5HC2H
Endonuclease_7
PHD
Motif
Other DBs
NCBI-GeneID:
103959825
NCBI-ProteinID:
XP_009370466
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MGLRYIAISAACTAISFAGLQLWTETSLVKLKSDGLIAENLINAANFGHVFDLLLGSYTT
VGLLANFVLNAFILLVLCLKTIFFVELYSSETRKLIERLINYVIYKGTFLPLVIPPTIYH
AGLWSVWLIVLCSLKMFQALARDRLERLNASPSVTPLTYFRVYSVLLLVLTVDIFWIRLC
VVIYKTLGVSMFLLLLFEPFSIAFETLQAILVHGFQLLDIWIHHSAWNSSNCERSKLFDT
SAVGLLLEWKGSLTRNLGFVLDMATLLMALGHYVHIWWFHGMAFHLVDAILFLNIRVNIC
ALLSSIVKRIKGFIKLKKALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCSHL
FHLACLRSWLDQGLNEIYSCPTCRKPLFVGRPENEVHPRSEETSSDEQLARQISLGLDRQ
NTPGHAIPAGVFPNQTQSPAEGDPWRGTGLDSDWLHTWPSQGVDGAGPSTAMGSVGMGRV
QMMMRHLASVGEAYAHTALEDGAWSLWPMNAPQVAATGPPIPPADGGRNQGGARNLHMRT
PARTVNDNLANILAMAETVREVLPHMPDDLIFQDLQRTNSVTVTVNNLLQM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaggtatatagccatctccgctgcatgtacagcgataagctttgcgggcctc
cagttgtggacggaaacttctttagttaaactaaaatcggatggactaattgcggagaat
ttgattaatgctgccaattttggccatgtatttgatctgcttttgggttcttatactacc
gttggactgctggcaaattttgtactcaatgcattcattttactcgttttatgtctcaag
actatattctttgtggagttgtattcttctgaaactcgcaaattaattgaacgccttatc
aattatgttatttacaagggcacttttctacctctggtcattcctcctacaatatatcat
gcgggcctgtggtcagtctggttgattgttctttgttctttaaagatgtttcaagctttg
gctcgagatcgacttgaacggttgaatgcatccccttctgtcacaccattgacatatttt
cgtgtgtattcagtgttattgctggtgctgactgttgacattttctggataaggctgtgt
gtggtgatatataaaacactgggtgtatctatgtttctcttgttattatttgagcctttc
agtattgcatttgagacattgcaggctattttggtgcatggatttcagttacttgatata
tggatccatcattcagcatggaacagttcaaattgcgagaggtccaaattatttgataca
tcagcagttggtttattgttggaatggaaaggcagtcttactcggaatttgggttttgtt
cttgatatggcaacattgttaatggcccttggtcactacgtgcatatttggtggtttcat
ggcatggcattccatctggtggatgcaatcctttttctaaacatacgtgtaaatatttgt
gccttgctaagttcaattgtaaaacgtataaaagggttcatcaaactgaagaaagcctta
ggtgctcttcatgcagcacttccagatgcaacatctgaagaactacgggcatatgatgat
gaatgtgcaatttgtagggaacctatggctaaggccaaaagactacactgcagtcacctt
tttcatcttgcatgtttgagatcttggttggatcaaggtttgaatgagatctattcatgt
cctacttgtcgcaagccacttttcgtaggtagacctgaaaatgaagtacatccccgcagt
gaagaaacttcgagtgatgagcagcttgctcgtcaaataagtttgggacttgatcgacaa
aatactcctggacatgcaatacctgctggtgtgtttcccaatcagactcagagccctgca
gaaggcgatccatggagaggtacaggactggattcagattggttgcatacttggccaagc
cagggagttgacggggcaggtccttctacagctatgggatctgttggaatggggagagtt
cagatgatgatgaggcatcttgcatctgtaggggaggcgtatgcccacacggcccttgaa
gatggtgcgtggagcctctggcctatgaatgcccctcaggttgctgcaactggtccaccg
attcctcctgcagacggtggaagaaaccaaggaggagcacgaaatttacatatgaggacc
cccgcacgtactgtgaatgacaacctagcaaacatacttgctatggctgagacggtgagg
gaagttctgcctcatatgccggatgacctaattttccaggatttgcagcgaacaaattca
gttaccgttactgtgaataatcttctccaaatgtga
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