Pyrus x bretschneideri (Chinese white pear): 103960526
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Entry
103960526 CDS
T03446
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103960526
09123 Folding, sorting and degradation
03018 RNA degradation
103960526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103960526
03041 Spliceosome [BR:
pxb03041
]
103960526
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103960526
mRNA degradation factors
5'-3' decay
Lsm complex
103960526
Spliceosome [BR:
pxb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103960526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7452
Motif
Other DBs
NCBI-GeneID:
103960526
NCBI-ProteinID:
XP_009371285
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MAANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITPEG
RRITKLDQILLNGNNIAILVPGGSPEAE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacaatccttcgcagctactcccatcagagttgatcgaccggtgcataggc
tcgaagatatgggtgataatgaagggagacaaggagctcgtagggactctgaggggtttc
gatgtctacgtcaacatggtactcgaagacgtcaccgaatatgagattactcctgaagga
agacgtataaccaagcttgatcagattttactcaacggaaacaatattgccattctggtc
cctggcggctcacctgaagcggaatga
DBGET
integrated database retrieval system
