Pyrus x bretschneideri (Chinese white pear): 103960555
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Entry
103960555 CDS
T03446
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103960555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103960555
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103960555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
103960555
NCBI-ProteinID:
XP_009371323
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MVMSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMISS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcggcggtggtgaacacgtacccgctgtcgagctacacgttcgggaccaaa
gagccgaagatggagaaggacacttccgtcgccgatcgcctcgcccgcatgaaagtcaat
tacatgaaagagggaatgcggaccagcgtcgaagcgattttactggtacaggaacataat
catccccacatacttctcctgcagattggaaacacattctgcaaacttcctggtggacga
ctgaagccaggggagaatgaaattgaggggttgaaaagaaagctgaccagcaagcttggt
gctaattcacctgcccttgtgccagactggcagataggagagtgcgtggctatctggtgg
agaccaaactttgaaaccataatgtacccatattgccctcctcacataacaaaacccaag
gagtgtaagaagcttttccttgttcacttatctgagagggagtacttcgctgtccccaaa
aacctaaaacttcttgctgttccattgtttgagctctatgataacgttcagagatatggg
ccagttatatctacaatcccacagcagctttccagattccagtttaacatgatcagttca
tga
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