Pyrus x bretschneideri (Chinese white pear): 103960830
Help
Entry
103960830 CDS
T03446
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103960830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103960830
Membrane trafficking [BR:
pxb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
103960830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
TPR_19
Motif
Other DBs
NCBI-GeneID:
103960830
NCBI-ProteinID:
XP_018506316
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MVHSAYDSFELIGDCPTKIEAIESYGPKLLLGCSDGSLKIYAPDSSGSDRTPPSDYHAHK
LQKEPYALERNVAGFSKKPLVSMEVLESRELLLSISESIAFHGLPNLGTIAVITKAKGAN
VYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICIGIRREY
MILNSTNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVFVDQNGKLCQEGRVCWSDP
PNVVVIQKPYAIALLPRYVEVRSLRDPYPLIQTVVLRNACRILQSNTAVIVALENAVYGL
FPVPLGAQIVQLTASGDFDEALALCKMLPPEEASLRAAKEASIHMRYAHHLFDNGAYEDA
MEHFLASQVDITYVLSLYPSMVLPKTTMVAVPEKLMDISGDSSYLSRGSSGLSDDMEHSL
PSVLESEESAALESKKMSHNTLMALVKFLQKKRYGIIEKATAEGTEEVVLDAVGDNFVSY
ESRFKKSNKGRGSIPVTSGAREMAAILDTALLQALLLTGQASVALELLKGLNYCDVKICK
EILQENNHYAALLELYRCNSMHHEALKLLHQLVEGSKSNQVQTELIQKLKPESIVEYLKP
LCGTDPMLVLEYSMLVLESCPTQTIQLFLNGNIPADLVNSYLKQHAPNMQATYLELMLAM
DENGVSGNLQNEMVHIYLSEVLDWYADLSAQQKWDEQTYSSTRKKLLSALESISGYSPEA
LLKRLPADALYEERAMLLGKMNQHELALSLYVHKLHVPELALSHCDRVYDSLIHQPSSRS
SGNIYLTLLQIYLNPRKTTKNFEKRITNLVSPQNIGTPKVGSANTVKSKGGRGAKKIAAI
EVAPDIRVSQSSTDSGRSDGDAEEYSEEGGSTIMLDEVLDLLSQRWDRINGAQALKLLPR
ETKLQHLLPFMGPLLRKSSEAYRNLSVIKSLRQSENLQVKDELYEQRKGVVKITSDSMCS
LCRKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKTVGRGSPLWKR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggtacacagtgcctatgattccttcgagctcatcggtgactgcccgacgaagatcgaa
gccatcgaatcctacggtccgaagctcctcctcggctgctccgatggatctctcaaaatc
tacgctccagactcctccggctccgaccgcactccgccgtctgattaccacgcgcacaag
ctccagaaggaaccgtacgcgcttgagaggaacgtcgccggtttctcaaagaagcccttg
gtttcaatggaggtcctggaatcccgagagctcctcctttccatctcggagtcgattgcg
tttcacggcctcccgaacctgggcaccatcgccgtgatcacgaaggcgaagggcgccaat
gtctactcgtgggacgaccgcagaggattcctctgcttcgcgaggcagaagcgggtctgt
attttccggcacgacggtggacgagggtttgtggaagtgaaggaatttggggtcccagat
gtggtgaagtcgatgtcatggtgtggagaaaatatatgcatagggattagaagagagtat
atgatactgaattctacaaatggtgcattgtctgaggtgtttccttcggggagaatagcg
ccgccgctggtggtttctcttccttccggagagcttcttctcggaaaggataacattggg
gtttttgtggaccaaaacgggaagctttgtcaagaaggcagggtttgttggtcggatccc
ccgaatgttgttgttattcagaagccatatgcaattgctttattaccaagatatgttgag
gttcggtcgctccgggatccctatcctttgatacagacggttgttcttagaaatgcttgt
cgtattctacagagcaatactgctgtaattgttgcattagagaatgctgtttatggtctc
ttccccgttcctcttggtgcccagattgtacaattaacagcatctggtgattttgatgaa
gcgttggcgttatgtaagatgcttcctccagaagaagcaagtcttagagctgcaaaggag
gcctcaattcatatgagatacgctcatcatctttttgataatggggcctacgaagatgcc
atggagcactttttagcatctcaagtagacataacctacgttctttctttgtatccatct
atggttcttcctaagacaactatggttgctgtgccagagaagctaatggatatttctggg
gattcatcatacctctcaagaggttcgtctggtttatcagatgatatggaacactctctt
ccatctgtactggaatctgaggagagtgcagcactcgagtccaagaaaatgagccataac
actctcatggctctcgtaaagttcttacagaaaaaaagatatggcataattgaaaaggcc
actgctgaggggacagaagaggttgttttagatgctgttggagacaattttgtgtcctat
gaatctaggtttaagaaatcaaacaaggggcgtggcagcattccagttacctctggtgct
agggagatggctgcaatcctggatacagcactactccaagctctacttcttactggacag
gcttcagtggctttggaattactgaaaggtcttaactactgtgatgtaaaaatatgcaag
gagatactccaggaaaataatcattacgctgctttgttagaactttacaggtgcaattca
atgcaccatgaagctctaaaacttttgcatcaattggtagaaggttctaaatctaaccaa
gtgcagactgaactgatccaaaagttaaagcctgagtcaattgttgaatatctcaagcct
ctgtgtgggactgatcccatgcttgtcctggagtattcaatgcttgttcttgaaagttgt
ccaacacagacaattcagctctttttgaatgggaatattccagcagacctggtcaactct
tacttgaagcagcatgctccaaacatgcaggccacatacttagagcttatgcttgcaatg
gatgaaaacggggtctctggaaatctgcaaaatgaaatggtacatatctatctatcagaa
gtacttgattggtatgcagatttaagcgctcagcagaaatgggatgagcaaacttactcc
tcaacaagaaagaaattattgtctgctttagagagtatctcaggatatagtccggaggct
ttgttgaaacgtcttccggcggatgctttatacgaagagcgtgcaatgttgttgggaaaa
atgaaccaacatgagcttgccttatctctctatgttcacaagcttcatgttcctgagctg
gcactgtcccattgtgatcgcgtgtatgattccttaattcatcaaccatcttcaagatct
tccggcaatatatacctaactctattacaaatttatcttaatccgaggaaaacaaccaag
aactttgagaaacgaattacaaatttagtatcacctcagaatatcggtacaccaaaggtt
ggttctgcaaatacagttaaaagtaaaggaggtcgtggtgctaaaaaaattgctgcaata
gaggtggcacctgacataagagtcagtcaaagtagcactgacagtggcaggagtgatgga
gatgcagaggaatatagcgaggaaggagggtcaacaatcatgcttgatgaggtcctcgat
ttgttgagccaaaggtgggacagaattaatggagctcaggcacttaaacttttgccaagg
gaaactaagctacagcacttgcttccatttatgggacctctgttgagaaaatccagtgaa
gcgtacaggaacctttcagtgatcaagagtttgaggcaaagtgagaacctgcaggttaag
gatgaactctatgaacaaaggaaaggggtggtgaagatcaccagtgatagcatgtgctcc
ctttgcaggaagaaaataggaacaagtgtctttgccgtgtatccaaacgggaaaacatta
gtgcactttgtgtgctttagagactcgcaaagtatgaaaactgtgggcagaggatcgccg
ctatggaagcgatga
DBGET
integrated database retrieval system
