KEGG   Pyrus x bretschneideri (Chinese white pear): 103960939
Entry
103960939         CDS       T03446                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pxb03400]
    103960939
DNA repair and recombination proteins [BR:pxb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103960939
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 103960939
NCBI-ProteinID: XP_009371712
LinkDB
Position
Unknown
AA seq 1036 aa
MGKNKVTDELLSTVRSIVDSGYSDMDIIRALHMANNDVTAAINIIFDTPSFKLKERPPAS
RKNPQILSSEVVNLKQNGGQKSNCTLGTEGNGSSCPSNSGDDVVEEVAVARSESSAGSEW
WFVGSSEVSGLSTCKGRRLSPGDEVEFTFPTKSSSTSPSPGKVFGRGRQAAACSEIVRFS
TKDSGEIGRIPKEWARCLLPLVRDKKVRIEGHCKSAPDVLSIMDTILLSISVYINSSMFL
KQNKTSLKAANNSTDETVVHPLPTLFRLLGLTPFKKAEFTPSDLYTRKRPLDPKDSFGLC
APVLRANKPKIPGQNGDEVENEESISDADLENIVGIGDSSELEEMDPPGTLQCELRPYQK
QALHWMIQLEKGHCMDEGAMTLHPCWEAYRLADKRDRVIYLNAFSGDATTEFPSTLQMAR
GGILADAMGLGKTIMTISLLLTHSGHGLSVSYPTSQSSSEDIEVPDIADHSSDLPKKVPK
FSGFDKLLKQKNTVEDGGCLIICPMTLLGQWKAEIETHAKPGSLSVYVHYGQSRPKDAKF
LVQSDVVITTYGVLASEYSAENPKENGGLYSVSWFRVVLDEAHTIKSSKSQISIAAAALV
AGRRWCLTGTPIQNNLEDVYSLLRFLRVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSIL
KPIMLRRTKFSTDREGRPILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQG
RVLHNYASILELLLRLRQCCDHPFLVMSRGDTQDFSDLDKLARRFLKGKQNSVEGEAKDL
PSRAYVQEVVEEIRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSSSGLCPVC
RKTISKQDLITTPTESRFQVDVEKNWVESSKVVILLRELESLRSSGTKSIVFSQWTAFLD
LLQVPLSRSNIPFLRLDGTLNQQQREKVLKQFSEDSDIQVLLMSLKAGGVGINLTAASNA
FVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMEAVQARKQRLISGALTD
QEVRTARIEELKMLFT
NT seq 3111 nt   +upstreamnt  +downstreamnt
atggggaaaaacaaggttacggacgaactgctgtccaccgtccgatcaatcgtcgactcg
ggatactccgacatggacattatcagagccctccacatggccaacaacgacgtcaccgcc
gcaatcaacataatctttgacacgcccagtttcaaattgaaggaaagaccaccggcttct
cggaagaatccccaaattttgagctccgaggtcgtaaatttgaagcaaaatgggggtcag
aaaagtaattgcactttgggtaccgaaggaaatgggagtagttgccccagtaattcaggg
gacgacgtggttgaagaagtcgcggttgcacggagcgagagctcggctgggagcgagtgg
tggtttgtgggcagcagtgaagtttcggggttatcaacgtgtaaaggtaggaggcttagc
cctggagacgaagtggaatttacttttccaacaaagagcagttcaacatctccatcaccc
ggcaaggtttttgggaggggacggcaggcagctgcttgttcggagattgtgaggttttca
acgaaagattcaggagagattggtagaattccgaaggaatgggctcggtgtttattgcca
cttgtgagggataagaaggttagaattgaggggcattgcaaatctgctcctgatgtgttg
agcattatggacaccattcttttgtcaataagtgtgtatatcaatagttcaatgttcctt
aagcaaaacaagacctcacttaaggcagccaataattccactgacgaaacagtggttcac
cctcttccaacattgttccggttgctaggactgactcctttcaagaaggcagaatttact
ccgagtgacttgtacacgagaaagcgccctttggacccaaaggatagctttggactttgt
gccccagtattacgtgccaataagcctaaaatccctggtcaaaatggagatgaagttgaa
aatgaggagtctatttcagatgctgatcttgaaaacattgttggtattggtgacagctct
gagctagaggaaatggatcccccaggtacacttcagtgtgaacttcggccgtaccaaaag
caggctcttcattggatgatccaactggaaaagggacactgcatggatgagggagcaatg
actcttcacccttgttgggaggcatatcgtcttgcagacaagagggaccgtgttatctat
ttgaatgcattttctggtgatgcaacaacagaatttccaagcacacttcaaatggccaga
ggaggaattctggctgatgctatgggcttggggaagaccattatgacgatatcgctcctt
cttactcattcaggacatggattatcagttagttaccctacaagccagtcttccagtgaa
gatattgaagtccccgacattgcagaccactcatcagacctaccaaagaaggtcccaaaa
ttttcaggatttgataagttgttgaagcaaaaaaacacggttgaggatggtggttgtttg
attatatgtcctatgactcttctaggccagtggaaggcagagatcgaaactcatgctaaa
cctgggtctctatcggtatatgttcattatggacaaagtagaccgaaggatgcaaaattt
ttagttcaaagtgatgtcgtaatcactacatatggagtgttagcctctgaatattctgct
gagaatccaaaggaaaatgggggactttactcggttagttggtttagagtggttcttgat
gaggcgcataccataaaatcctcaaaaagccaaatttccattgctgctgctgctttagtt
gctggtcggcgatggtgtcttactggcacacccatacagaacaacctggaggacgtttac
agtcttctccggtttttgagggtagaaccttggggaaactgggcatggtggaataaactc
atacaaaaaccttttgaggagggtgatgagagaggattaaagttggttcagtctatctta
aagccaatcatgttaaggagaacaaagtttagcacagaccgtgaaggcaggccaatttta
gttcttcctccagctgatattcaggtgatttactgtgaactcacagaagctgaaaaagac
ttctacgaggccctctttaaaagatcaaaggtgaagtttgatcaatttgttgagcaagga
cgggttcttcataattatgcatccatattggagttgcttttacgccttcgccagtgttgt
gatcatccatttcttgtgatgagccgaggtgatacacaagacttttctgatctggataag
ctagctagacgtttccttaaaggaaaacagaattctgtggaaggggaagccaaagatctg
ccttcacgtgcttatgttcaagaagttgtagaagaaatacgtaagggggaacagggagag
tgtccaatatgtcttgaagcctttgaagatgcagtgttaacaccttgtgctcaccgctta
tgccgtgaatgtctcttggcaagttggcggaactcaagttctggtctctgtcctgtttgt
aggaagaccatcagtaagcaagatcttattacaacacccactgagagtcggtttcaggtt
gatgttgagaaaaactgggtggaatcatccaaagttgtcattcttttgcgtgaacttgaa
tctcttcgctcatcaggcacaaaaagcattgtcttcagccagtggacggcttttctggac
ctcttgcaggtccctctttctaggagtaacattccatttcttcgccttgatgggactctg
aatcaacagcagcgtgagaaagtgttaaaacagttttcagaagatagtgacatccaggtg
ttgctaatgtcactgaaggctggaggagttggaataaatctgacagcagcatcaaatgct
tttgtcttggatccatggtggaatccagcagtcgaggaacaagctgtcatgcgtattcat
cgcattggacaaacaaaaagggtgatgatcaagcggtttattgtgaagggaacggttgag
gaacgaatggaagcagtgcaagcacgtaaacagcgactgatttccggagccttgacggac
caagaagttcgaacggctcgcatagaggaactaaagatgctttttacttga

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