Pyrus x bretschneideri (Chinese white pear): 103961012
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Entry
103961012 CDS
T03446
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
pxb03015
mRNA surveillance pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103961012
09122 Translation
03013 Nucleocytoplasmic transport
103961012
03015 mRNA surveillance pathway
103961012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103961012
03041 Spliceosome [BR:
pxb03041
]
103961012
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103961012
TREX complex
103961012
Spliceosome [BR:
pxb03041
]
Complex C
Other components
EJC/TREX
103961012
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103961012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
103961012
NCBI-ProteinID:
XP_009371789
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MSTALDMSLDDMIKNSRGNRDRNREQRGRGSRGRGGARGSFNAGRMAAGRIPAGRITGLV
RRGPLPGGARPSSYTIAKSTRRTKRFPWQPDLFEDGLRAAGISGIEIGTKLYVSNLDYGV
TNEDIRELFSEIGEMKRYAIHFDKNGRQSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMK
IELVGASAGMPISARVNVTGVHGRKKRTVVMTPGPGNAGGYAMPMVNRGSGGSSRGGNRN
GRGKPRGSGSSSGRGRGRGRGRGGEWRKKHVEKSVDELDKELDSYHTDIMQS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgctttggatatgtcgcttgatgacatgattaagaacagcaggggtaatcgt
gacagaaatagagaacaacgcggtaggggttctcgtggccgtggtggagcacgtggctcc
tttaatgctggaaggatggccgctggaagaattccagctggaagaattacaggacttgtt
cgtagaggtcctctcccgggtggtgctcggccgtcctcgtataccattgccaagtctacc
cgccgaaccaagcgtttcccatggcagcctgatttgtttgaagacggccttagagctgcg
gggatatcagggattgaaattggcacaaagttatatgtatctaacttggactatggagtg
acaaatgaggatataagggaacttttctctgagatcggagagatgaagcgatatgcaata
cattttgacaaaaatggtcgccaaagtggttcagctgaagtggtttatactagaagaagt
gatgcattcgcagcattgaagcgctataataatgttttattggacgggaagcctatgaaa
attgagcttgttggtgccagtgcagggatgcctatttcagctcgtgtgaatgtgacaggc
gtgcacggaaggaagaaaaggactgttgtaatgacgcctggacctggtaatgctggtggc
tatgctatgcctatggttaaccgcggttctggtgggagcagccgtggagggaatagaaat
ggtcgagggaaaccacgtgggagtggcagcagcagtggtcgtgggcgtgggcgtgggcgt
ggtcgtggtggagagtggaggaagaagcatgtggagaagtcggttgatgaactcgacaag
gaactagatagctatcacacagatatcatgcagagttag
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