Pyrus x bretschneideri (Chinese white pear): 103961244
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Entry
103961244 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103961244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103961244
03009 Ribosome biogenesis [BR:
pxb03009
]
103961244
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103961244
Spliceosome [BR:
pxb03041
]
Complex A
U1 snRNP components
U1 related factors
103961244
Complex B
103961244
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Helicases
103961244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Transformer
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103961244
NCBI-ProteinID:
XP_018506414
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MASVEPAGPRYAPDDPTLPNPWKGLIDGSTGLLYYWNPETNVTQYEKPASLPPPLPAGPP
PATTTPKLAAIPVAHSMQPNGVMPQDGQQITQAPQQQGSQINQYSQPHGQIMAQQLNPTS
YAQQQGSQMAQPGHQQSSQVGQAMQHHGHMMQHPGQQMPQQLGQHTPQSHGSQMHQFAHQ
QMHYIPYQQSIPPQGQQSSQQQSMHSAQGQPLANQQEYKPAFSQREEDDFQQRNQIGVSP
SRFQPAGASSVQNLPTGTNPVQMPQRSVHQGPPQQFGGPIGNMQHPSSFGHLQQPGADLP
HNQHGSRFQNQMDPAMIRGQQSNVPPVGLRMGHEDNFHGRGGNDYYFNSNNEGPPGPQQP
KLASIPIARSQQEMSMSGGPPFQNATPGRANALNTMPGPMHNVYSHATGGPPFPNNSLVK
PPYAGPTSVTSLSPVEVYRQQHEVTASGDNVPAPFMTFEDTGFPPEILREIHAAGFTSPT
PIQAQTWPIALQSRDIVAIAKTGSGKTLGYLMPAFILLRQRRNHSQNGPTVLVLAPTREL
ATQIQDEVLKFGRASRVSCTCLYGGAPKGLQLKELDRGADIVVATPGRLNDILEMKKIDF
RQVSLLVLDEADRMLDMGFEPQIRKIVDQIPPHRQTLMYTATWPKEVRKIASDLLVNPVQ
VNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIVFCSTKRLCDQIARS
IGRTFGAAAIHGDKSQGERDWVLNQFRSGKSPVLVATDVAARGLDIKDIRVVVNYDFPTG
VEDYVHRIGRTGRAGATGMSYTFFSEQDWKYAADLIKVLEGANQQVPPEVREIALRGGAG
FGKDRNPMNRFDSGGPVNGGTGRWDSGGRDGMRDGGFGSRGGTRDGGFGGRGGMRDGGFG
GRGGMRDGFGGRGGPRDGAVGGRGGRGDFFSGPGNRGRGFGGPGGGNVGWGRNGSGPQDR
YNSMDGRGGRGRGRFDNRVDFPDRSRGRSYSRSPDRVRTWDINRSRSRSRSRSRSRRRRR
RSRSGSWSRGRSRSYSRSRSRSRNHSRSPSYERYERPPRVSKFDVKDPVPESGAPPVPEM
VPMSPDTKPMGELPVVEETEPVHTQVVGGDPSHHPAT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtggagccagccggtccacgatatgcgcctgatgatcctacacttccaaat
ccgtggaagggtttgattgatggtagtacgggtttgttatactattggaatcctgaaact
aacgttacccagtatgaaaaaccggcttctttgccgccacccttgccagcaggcccgcct
cctgctactaccacaccaaagctagctgcaattcctgttgctcattcaatgcaaccgaac
ggagtgatgcctcaggatgggcagcagataacacaagctccacaacagcaggggtcgcaa
ataaaccagtattctcaaccgcatggacagataatggcacaacagctgaatccaacatca
tatgctcaacagcagggatcacaaatggctcaacctggacatcaacagagttcacaagtg
ggacaggccatgcaacatcatgggcatatgatgcagcatccgggtcagcaaatgcctcag
caactggggcaacacacaccacagagccacgggtcacaaatgcatcagtttgcacatcag
cagatgcattatatcccttatcagcaaagcattcctccccaagggcagcaaagttcacaa
cagcaatctatgcatagtgcacaagggcaaccactggcaaatcaacaagaatataaacct
gcattctctcagagggaggaagatgattttcaacaaagaaatcaaattggtgtttctcca
tctcgatttcaacctgcgggtgcctcatctgtgcagaatcttcctactgggaccaatcca
gtacaaatgccacagaggtctgttcatcaagggccaccccaacaatttggcggccctata
ggaaacatgcaacacccttcctcttttggtcacttgcagcaacctggggctgatttgcct
cacaatcaacatggttctaggttccaaaatcaaatggacccggcaatgatacgtggtcag
cagtcaaatgtgcctcctgtaggattaagaatgggtcatgaagataatttccacggtaga
ggtggaaatgattattacttcaatagtaacaatgaagggccaccaggtcctcagcaaccc
aaacttgcatctattccgattgcaagaagtcagcaggagatgagtatgagtggtggtcct
ccatttcaaaatgctacacctggtcgtgccaatgcactgaataccatgccaggtcccatg
cataacgtgtacagtcatgcaacaggtggtccacctttcccaaataactctttggtgaag
cccccttatgccggacctacaagtgttactagtctttcacctgttgaagtttatcggcaa
caacatgaagttactgcatcgggtgacaatgttcctgcaccgttcatgacatttgaagac
actggttttcctccagagatattgagagagattcatgctgctggcttcacatctcccaca
ccaattcaggcacaaacatggccaattgctcttcaaagtagggatatagttgcaattgcg
aaaactggttctggaaaaactttgggctatttgatgcctgcattcattcttcttagacaa
cgccgtaatcattctcagaatggcccaacagtcttggttttggccccaacacgggagctt
gcaacacagatacaagatgaggtcttgaaatttgggcgagcttctagggtatcttgcacg
tgcttgtatggtggagctccaaagggccttcagctaaaagagttggatcgtggagcagat
atagttgtggcaactcctggtcgtcttaatgacatactggaaatgaagaagattgatttt
cggcaagtttctctacttgtacttgatgaagcagatcgaatgcttgacatgggttttgaa
cctcaaatccgtaaaattgtggatcaaatacccccgcacagacaaacccttatgtacaca
gcaacatggcccaaagaagtaagaaaaatagcaagtgaccttcttgttaatcctgtacaa
gtgaatattggcaacgttgatgagcttgctgcaaacaagtctatcacacagtacgttgaa
gttgttccacaaatggagaagcaaaggcgcttggagcagatcctaagatcccaagaacga
ggttctaagatcattgtcttttgttccaccaagaggttgtgcgatcagattgcacgtagt
attggacgcacttttggggctgctgcaattcacggggacaagtctcaaggtgagcgagac
tgggttttaaatcagttccggagtggaaaatccccagtattagttgccactgacgttgct
gctcgtgggcttgacatcaaagatataagggtggtggtaaactatgatttccctactggt
gttgaagactatgttcaccgaattggaagaactgggagggctggcgcaactgggatgtcc
tacacctttttctccgagcaagactggaaatatgcagctgatttgattaaagttctggag
ggagctaaccagcaagtgcccccagaggtgcgagagattgctctacgtggtggggctggt
tttggcaaggataggaatccgatgaaccgttttgattccggtgggcctgttaatggtggt
actggccgctgggattccggcggccgtgatggaatgagggatgggggttttggtagtcgt
ggcggtacaagggatgggggttttggaggtcgtggtggcatgagggatggtggttttggt
ggtcgtggcggcatgcgagatggctttggcggtcgtggtggccctagggatggtgctgtt
ggcggccgtggtgggagaggcgatttcttttctggacctgggaacaggggccgaggattt
ggtggtcctggtggtggtaatgttggttggggtagaaatggcagtggcccgcaagatcgg
tacaacagtatggatgggcgtggaggacgtggacggggacgatttgataatagagttgat
tttcctgacaggagcagaggcagaagctatagccgtagccctgacagagttcgaacatgg
gatatcaacagaagcagaagccggagtcgaagccgcagccgcagccggaggaggaggagg
cggagccgtagcgggagctggtcccgtggccgtagtcgcagctacagtcgtagccgaagt
cgtagtcgtaaccatagtcggagccccagttatgaaagatatgagaggccgccacgcgtt
tcgaaatttgacgtgaaggatcctgttcctgaatctggggctccacctgtaccagagatg
gttcctatgtccccagacaccaagcccatgggcgaactgccagtggttgaggaaactgag
ccagtgcatacacaggttgttggaggagacccttctcatcatccagcgacttaa
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integrated database retrieval system
