Pyrus x bretschneideri (Chinese white pear): 103961681
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Entry
103961681 CDS
T03446
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103961681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103961681
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103961681
mRNA degradation factors
5'-3' decay
Decapping complex
103961681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
103961681
NCBI-ProteinID:
XP_009372533
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNA
RECEEVANLFTRILNAYSKAPPKSKISSTKSEFEELEAVPSMLVMEGPLEPSLNAPAVTD
APEDSSFINYLAAMNIGNNASDATNSRLPYQSTGTVPAPSYAPSAVSPPAPTPQIPPLSH
SVPSMPTPLHGSSDQTTSNNRVANLIKPSSFFPLPASSPPLVVPPTSSSVPSAAALHPPL
NLQRPYGTPMLQPFPPPTPPPSLTPNSVPPAPSDGPLVSREKVREALVMLVQDDQFIDMI
CQALLKVHHT
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacggggaaattgatgccgaatctcgatcagcagagcaccaaaatgctcaat
ctcacggtgctgcagagaatcgaccccttcatcgaagagattctgattacggccgcccac
gttaccttctatgaattcaacatcgagagcaatcaatggagtcgcaaggatgttgaaggg
tctctctttgttgttaaaaggaatactcaaccgcggttccagttcatcgttatgaatcgg
cgcaatacagataacctagtggagaatctcttgggagattttgagtatgaagttcaagtt
ccatatttattgtatagaaatgctgcccaagaagttaatggcatttggttttataacgct
cgtgaatgtgaggaagttgcgaatctctttactaggatcctgaatgcatactcaaaggct
cctcccaagtccaaaatatcttcaaccaaaagtgagtttgaagaacttgaagcagtccca
tccatgttggtcatggaagggccgttggagccatcattgaatgcccctgctgtcactgat
gcacctgaagattcttcctttataaactacctggcagcaatgaatattggaaataatgct
tcagacgcaacaaattcaagactgccctatcagtctactggaactgttcctgcaccttct
tatgcacccagtgctgtttcacctcctgcaccaactccacaaataccaccactttcccat
tcagtcccatctatgccaacccccctacatggctcctctgaccaaaccaccagcaacaat
cgggtcgctaatcttataaagccctcttctttcttccctctccctgcttcctcgcctcct
ttggtcgtaccacctacctcttcatctgtgccatctgctgctgcacttcatccacccctg
aacctgcaacgcccttatggcaccccaatgcttcaaccctttccaccaccaacgccccca
ccatctttaacacccaattctgttcctcctgctcccagtgacgggcctcttgttagcaga
gaaaaagtgcgagaagcacttgtaatgcttgttcaggacgatcaattcatcgacatgata
tgccaagcattgctgaaagtgcaccatacatga
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