Pyrus x bretschneideri (Chinese white pear): 103961698
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Entry
103961698 CDS
T03446
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103961698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103961698
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103961698
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103961698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
103961698
NCBI-ProteinID:
XP_009372560
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MSSSGPPPPKPPPPRDILIRSVWSDNLESEFELIRSVIDDYPLISMDTEFPGVVVRPDSN
DPNFYHREPAAHYLMLKANVDRLNLIQVGLTLSDDSGNLPDLGTKNLYIWEFNFRDFDVA
RDAHAHDSVELLRRQGIDFERNRDFGVDSVRFAELMMSSGLVCNDAVNWVTFHSAYDFGY
LVKLLTQRVLPDELSVFLNYVRVFFGSGVYDVKHLTRFCAALYGGLDRVCQTLNVDRIAG
KSHQAGSDSLLTLHAFQRIREVYFPKDGIVKYAGVLYGLEVS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatccggcccccctccacccaagcctccgccgccgcgagacatcctgatccgc
tcggtgtggtccgataacctcgagtccgagttcgaactgatccgatccgtcatcgacgat
taccctttgatttccatggataccgaattcccgggcgtcgtggtccgacccgactccaac
gatcccaatttctaccaccgcgagcccgccgcgcactacctcatgctcaaggccaacgtc
gatcgcctcaatctgatccaggtcggcctcaccctctcggacgacagcggaaatctaccg
gatttggggaccaagaatctgtatatatgggaattcaatttccgggacttcgacgtcgcg
cgggacgcccacgcgcacgactcggtcgagttgcttcgccgccaggggatcgatttcgag
cggaaccgggatttcggggtggactcggtccgcttcgcggagctgatgatgtcgtcgggt
ctcgtctgcaacgacgctgttaactgggtcacgttccacagcgcctacgatttcgggtac
ctggtcaagttgttgactcagcgagtcttgccggacgagttgtcggtgttcttgaattac
gtgagggttttctttgggtctggagtgtacgacgtgaagcacctgacgaggttctgcgcc
gccctctatggtgggctggaccgggtctgccagacactgaatgtggaccggattgccggt
aagagccaccaggccgggtcggatagcctgctaaccctgcacgcgttccagaggatcaga
gaggtctattttcctaaggacgggatcgtgaagtacgccggcgttttgtatggtctagag
gtttcttga
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