Pyrus x bretschneideri (Chinese white pear): 103962671
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Entry
103962671 CDS
T03446
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103962671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103962671
03036 Chromosome and associated proteins [BR:
pxb03036
]
103962671
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103962671
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103962671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103962671
NCBI-ProteinID:
XP_009373695
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MFGSSNPFGQSSSSPFGSQSVFGQTSSTNNNPFAPKPFGSTTPFGAQTGSNMFGGTSTGV
FGATQASSPFPSSTTFGAASSPAFGNTTPAFGATSSPSPSPFGGSSGFGQKPVFGAFGSN
PAQTSPFGSTTQPSQPAFGSSVFGSSTPFGGSSQPAFGATTTPAFGATSTPAFGATSSPA
FGATSSPAFGATTTPAFGATTTPAFGATSTPAFGAATTPAFGATSSPAFGSTASPTFGST
GAAFGVSSSPLFGSGGAFGASSTPAFGSSSSTFGTSTNPAFGASSAPGFGASSTPSFSFP
STPTFGQSSSAFGSSQFTTSSPFGAQSSPFGAQSTTFGNTGAFGHSAFGGQQRGGSRVAA
YAATPEPDGGTGTSAAGKLESISAMPAYKEKSHEELRWEDYQLGDKGGPAPAGASGFGIT
TSQPNPLNPAQAFPQASSPFNATTSSNLFAPKTPSFTNTGFATSSTPFSSSGFGISTSTS
PFTPSQPSTVFPQTSSPSLFSSSSSAYSFPAPAATATSTFNSNPFNPTPPAAQTGGAFTN
PFGQNTTFSQPFSNPSTGFGLTISTAAGATSSQMGFSQPAPTFSAPFSSQPTQNSGFNFN
SFNQTQSGYTGGLGSSTGILGQNNFGQLPVTQSSAAVQPLPATNPFGTLPAMPQMSIGRG
GTAPSIQYGISSMPVVDKPAPVKVSYLLTSRHLSQRRVRLPARKYNPKNDDPRFPFFVDD
EETDNTPKADALFLPRENPRALVIRPKEQWPQRVGAEKASPLKDTSTPLHENGKIPGEAG
SEDKDKTPKENGIVKERANHVKVNQKPNGVHDDHSVQEGDSYMTLSGHRAGEAAIAYEHG
ADIEALMPKLRRTDYYTEPRIQELAAKERAEPGFCCRVKDFVVGRVGYGSIKFFGETDVR
CLDLEALVQFNNREVIVYMDDNKKPPVGQGLNKPAEVTLLNITCTDKKTGRQFTEGPKTE
RYKQMLKKKAEDQGAEFVSYDALRGEWKFRVKHFSKYELGEEDDWDTDAAAAAAEDC
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttcttctaatccttttggacagtcatctagcagcccgtttgggtcccaatcg
gtatttgggcagaccagcagcacaaataacaatccttttgcccctaagccttttggtagt
acaaccccatttggtgcgcaaacagggagtaacatgtttggaggaacttcaactggtgta
tttggcgcaactcaagcttcttcaccttttccttcctccacaacctttggtgctgcgtcc
tcaccggcttttggaaatacaacgcctgcttttggagcaacttctagtccttcaccatca
ccttttggtggttcatctggttttggtcagaagcctgtgtttggagcatttgggtccaat
cctgctcaaacaagtccttttggaagtacaactcaaccatcacagccagcatttgggagc
agtgtatttggttcctccacgccatttggtggatcaagtcagccagcatttggtgctacc
actaccccagcttttggtgctacaagcaccccagcctttggtgctacgagtagtccagcc
tttggtgctacgagtagtccagcctttggtgctaccaccaccccagcttttggtgctacc
accacccccgcttttggtgctaccagcacccctgcttttggtgctgccaccaccccagca
tttggagctacaagtagcccggcctttggttccacagcaagtcctacatttggaagcaca
ggagctgcatttggggtgtcgagttctcccttgtttggatctgggggagcttttggggct
tcaagcaccccggcttttggttcatctagctcgacctttggtacttcaaccaatcctgct
tttggtgcttcaagtgctcctggttttggtgcgtccagtactccatcgttcagctttcca
tcaactcctacctttggccaatcaagttctgcatttggtagcagccagtttaccacttca
tctccttttggagcacagagttctccgtttggagctcaatcaacaacatttgggaacact
ggtgcctttgggcattcagcttttgggggccaacaacgcgggggcagtagagtggctgca
tatgctgcaactcctgaacccgatggtggcactgggactagtgctgctgggaaattggag
tcaatatcagcaatgcctgcatataaagaaaaaagtcatgaagaactccgctgggaggat
tatcaattgggggataaaggtggtccagctcctgctggtgcgagtggctttggcattacc
acctcacagccaaaccctttgaatcctgcacaggcatttcctcaagcctcaagtcctttt
aatgccacaacttcatctaatttgtttgctccaaaaactccatccttcacaaatacaggc
tttgcaacatcatctacaccattcagttcatcaggttttgggatttctacttcaactagt
ccttttacaccatcacaaccttctacagttttcccacaaacctcatctccgtctctcttt
agttcgtcaagctctgcatattcatttcctgctccagctgcaacagcaacttccacgttt
aattcaaacccgttcaatcccacacctccagctgcccagacaggtggtgcttttaccaat
ccatttgggcagaatacaacattttcgcagccattcagtaacccttctactggctttggt
ttaacgatctccactgctgctggtgctacaagcagtcaaatgggttttagtcaaccagct
ccgactttttctgcgcccttctcatctcagccaactcagaatagtggttttaacttcaac
agttttaatcaaactcaatcaggctacacaggtggtttgggaagttcaacaggaattctt
ggtcagaataactttggacagttacctgtcactcaaagctctgcagctgtacaaccatta
cctgctacaaatccatttggaacgctccctgcaatgccacagatgtcaattggtcgtggt
ggaactgcaccgtcaattcaatatggaatttcgagcatgcctgtcgtagacaaacctgcg
cctgttaaggtatcatatttgttgacctctcgacacctgtcgcaaaggcgggtcaggtta
cctgcgagaaaatataatcctaagaatgatgatccaaggttcccattctttgttgacgat
gaagaaacagataacacacccaaggcggatgctcttttccttcccagagaaaacccaaga
gcactcgtcattcgtccaaaagaacagtggcctcaaagggttggtgctgagaaagcatcc
ccattaaaggatacttcgactccactgcatgagaatggaaaaattccaggagaagcaggt
tctgaggataaagataaaacgccaaaagaaaatggaattgtgaaagagcgggcgaatcat
gtcaaagtcaaccagaaacctaatggagttcatgatgatcattctgttcaggaaggggac
tcatatatgacactaagtgggcatagggccggtgaagctgctattgcatatgagcatggc
gctgacattgaggccctaatgccaaagctccggcgtacagactattatacagagcctcga
atccaagaattggcagctaaggaaagggcggaaccggggttctgctgtcgtgtcaaggac
tttgtggttggacgagttgggtatggtagcatcaagttctttggggagacagatgtgcga
tgccttgatctcgaggctctggtgcagttcaacaatcgagaggtgatagtgtacatggat
gacaataagaaacctcccgtcgggcaaggcctcaacaaacctgctgaggttacactactc
aacattacgtgcactgacaagaaaacaggacgtcagttcacagaaggcccaaagactgag
agatacaagcagatgctgaagaagaaggcagaggatcaaggagccgagtttgtttcctat
gacgccttgagaggcgagtggaagttcagggtaaagcacttcagtaagtacgagttggga
gaggaagacgactgggataccgatgctgctgctgctgctgctgaagactgctga
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