Pyrus x bretschneideri (Chinese white pear): 103962908
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Entry
103962908 CDS
T03446
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pxb01002
]
103962908
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103962908
Enzymes [BR:
pxb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103962908
Peptidases and inhibitors [BR:
pxb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103962908
Ubiquitin system [BR:
pxb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103962908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103962908
NCBI-ProteinID:
XP_009373969
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MHVAGDLGFRSLVLVVCFLASVIGFFAVRRKWRLANARREEIRRLLVLAKEEVARAEFEV
TAGYGAVPVAEIKGSYCVVCYCPTTTRCARCKAVRYCSAKCQIVHWRQGHKEECRPPSII
HQNVVVASDSELKVTKEDLEINTDKFESRESVEKSSAEPALPNPGCRPDVECIRDDDSED
EFLAERKGTNSTSDSPATSFSGFSTSASGTESSDDVSVSGSVSSFEPDRSDGQPSADDAF
EIQQTPFNGNNIDQSKPSSPKFASLVDSVGGFAKLNKLNQVKLSVNDEENVRRSNSSSGL
NNSGMSEGPVAESCTPSSDFWGNTLDPVGSRSDAQVSNSSVASNRKISDSGSSLFSFNLS
GSTAPPLHRLDSRSSGTRLGDDLLDSSELSKSTCGADLSEKISGDAVKVKNSPSQKSKGS
KNEDNESSSNSHAFKFREIKSSSSPSVHKSVGTERISKCTHALKPSRVLSTSSERSDQAV
KNCNRTSDVLKSREAGTPSPSVSDSRHAPAVGGSLPLVKSGKVDFAEASNAVSSQATNLS
NNRNGLKTSVFKVFDQFRGSKIPKHYPVGVGSEIAGKYSEKEEHFRYELFVKLYNWNKVE
LRPSGLINCGNSCYANAVLQCLSFTPPLTAYLLQGFHSKACVKKEWCFMCEFESLVSKAK
EGSSPLSPMGILSQLRKIGSQLGNGREEDAHEFLRYAIDMMQSVCLTEAGVNSSRSLKEE
TTLIGLTFGGYLRSKIKCTKCQGKSERQERMMDLTVEIEGDIGTLEEALRRFTGTETLDG
ENKYQCSRCKSYEKAKKKLTILEAPNILTIALKRFQSGKFGKINKPIRFPEILDLAPFMS
STSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVRNSQNKWFMVDDSTVTPVELERVLTKG
AYMLLYSRCLPRAPRLIRNRIISPDPKHRAIPSWIGGKTTNLKPKSVSTHSAVAPSVPSA
HSPEELQRILEEDSSSDNSSLISNNSDEGSYSTDSTCCSPSTDDLSDYIFGHSVHGWSSS
FRKFSDSDTSSSSSPSSTTHSPLSDSYRYA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggctggggatttagggtttcggagcctcgtgctggtggtttgttttctggcg
tcggtgatcggattcttcgcggttcggagaaaatggcgcctcgctaacgccaggagggag
gagatcaggagacttttggtcttggccaaggaggaagttgctagagctgagttcgaggtc
acggctgggtacggcgctgttccggtagctgagattaaaggttcgtattgcgttgtttgt
tactgccccaccaccacgcgctgcgcccgctgcaaagcggttcgctactgttctgcaaag
tgtcaaattgttcattggcggcaaggtcacaaggaagagtgccgtcctcctagcataatt
caccagaatgttgtagtggcaagtgattctgaactaaaggtaaccaaagaagaccttgaa
attaataccgacaagtttgaaagcagggagtctgttgaaaaatcttctgcggaacctgca
ttgcctaatcctggttgccgtcccgatgttgaatgcataagggatgatgatagtgaagat
gaatttcttgccgagaggaaaggaacaaattctacatctgactcaccagctacctctttt
tctggattttctacttctgccagcggtactgaatcttcggacgatgtttctgtcagtggg
agtgttagttcatttgaacctgacagatcagatgggcaaccatctgctgatgatgccttt
gagatccagcagactccctttaatggtaacaacatcgatcaatctaagccatcatctcca
aagtttgctagcttggttgattctgttggtggttttgctaagttaaataagttgaatcag
gttaaacttagtgttaatgatgaagaaaatgtgcggagatcaaattcttcttcaggtttg
aacaacagtggcatgagtgagggtccagttgctgagtcttgtacgccatcctctgatttc
tgggggaacactcttgatcccgtagggtccaggagtgatgcccaagtgtccaattccagt
gtagctagtaatagaaagatatctgattctggatcttccttattttcattcaacttgtct
ggaagtactgcacctccccttcataggctagactccaggtcaagtggcaccaggttaggt
gatgatcttctggattcttcggagctcagtaagtccacttgtggagcagatttatcagag
aagattagtggagatgctgtgaaggtcaagaattccccatcccagaaaagtaaagggtca
aaaaatgaggataatgaatctagcagcaattcacatgccttcaagttcagagaaattaag
tcttcctcctcgccttctgttcataaatctgttggcactgaaagaatttcaaaatgcaca
catgctttgaaacctagtagagtgctatccacaagctcagaaaggtcagatcaggctgtt
aagaactgcaacagaacttcagatgttttgaagtctagagaagctggaactccatcaccc
agtgtttctgattctcgccatgcacctgctgttggaggctcacttccacttgtaaaatct
ggaaaagttgactttgctgaggctagtaatgctgtttcatctcaagctacaaatctttca
aataacaggaatggcttgaaaacctctgtatttaaggttttcgatcagtttagaggatcc
aaaataccaaagcactatcctgtgggagttgggagtgagattgcaggaaaatacagcgag
aaggaggaacactttcggtatgaattatttgttaagctttacaattggaacaaggtggaa
ttgcgcccttctggccttataaattgcggtaacagctgctatgccaatgcagtgctacag
tgcttgtcatttactccacctctgactgcttatttgcttcaaggattccattctaaagct
tgtgtaaagaaggaatggtgtttcatgtgtgagttcgaaagtctagtttcaaaggcaaag
gaagggagctctcctctgtctcctatgggaatactttcccagttgagaaaaattggaagt
caacttggtaatgggagagaagaagatgcccatgaatttctaaggtatgctattgacatg
atgcaatctgtttgccttacggaagctggggttaattcgtcacgctctttgaaagaagaa
acaactttaataggccttacatttggaggctaccttcgatcaaagataaaatgcacaaag
tgccaaggtaagtctgagcggcaggaaagaatgatggatcttactgttgagattgagggt
gatataggaaccctggaagaggctcttcgtcgatttactggtactgagaccttggatggc
gagaacaaataccaatgtagcagatgcaaatcttatgagaaggccaaaaagaagttgacg
atactggaagctccaaatatccttacaattgcactaaagcgttttcagtctggaaaattt
gggaagatcaataagcctatccggtttcctgagatcctggacttggcaccttttatgagt
agtacaagtgataaatcgcctatatacagactttacggggtggttgttcacttagatatc
atgaatgctgcattttctggtcactacgtgtgctatgtcaggaattcccagaacaagtgg
ttcatggttgatgacagcacggtaacacctgtggaacttgaaagggtcttgacgaaaggc
gcttacatgcttctttattcaagatgcttgccaagggcccctcgattgataaggaacaga
ataatctctcctgatcccaaacatcgagccattccttcctggatcggtggaaagactacc
aatttgaaaccaaaatctgtctccacacattctgctgttgccccttccgtacccagtgca
cattcaccagaggagctgcaaaggattttggaagaggactcatcaagtgacaattcttcc
cttatcagcaacaactccgacgaaggttcttacagtactgatagtacttgttgctctccc
agcaccgatgacttgtctgattacatatttggtcattcagtgcatggttggagtagctcg
tttagaaaattttcagattctgacacttcttcgtcttcctcaccctcgagtactacgcat
tcacccctctctgattcgtaccggtatgcttaa
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integrated database retrieval system
