Pyrus x bretschneideri (Chinese white pear): 103963842
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Entry
103963842 CDS
T03446
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103963842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103963842
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103963842
mRNA degradation factors
5'-3' decay
Decapping complex
103963842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
DUF5852
Motif
Other DBs
NCBI-GeneID:
103963842
NCBI-ProteinID:
XP_018507043
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSQNGKLTPNLDQQSTKLLNLTVLQRIDPFVEEILITSTHVTFYEFNTDLSEWSRKDVEG
SLFVVKRNAQPRFQFIVMNRRNTENLVEDLLGDFEFEVQHPYLLYRNAAREVNGIWFYNP
SECEEVANLFSRILSAYSKVPQKSMVSPTKSEFEELEEVPSMVVMYGPLEPSSSTASHVT
DVPDDPAFVNFFSTAMTIVTSSTTAITGQPYQSSSTVSLPSRPVGVAPSSIPGMQIPSAP
LLSSTTLASYLDLPESRNTTNLASNLVKPSSFFVHPSSSATTMPPVSASIPAAPLLQPAV
SVQRPYGAPLLQPFPPPAPPPSLTPASFPTPNYGPVNRDKVRNALMLLVQDNQFIDMVYG
ALQKAPHS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaacgggaaattgacgccgaatctggaccagcagagcaccaagcttctgaat
ctgacggttctgcagcgaatcgaccccttcgtcgaggaaattctcatcacctccactcac
gtcacattctacgagttcaacactgacctcagcgaatggagtcgcaaggacgttgaagga
tcgctcttcgtggtcaagaggaatgcgcaacctcggtttcagttcattgtgatgaaccgg
cggaatactgaaaatttggtggaggatctcttgggagattttgaatttgaagtccaacat
ccatatctattgtatcgaaatgcggctcgagaggtcaatggcatttggttctacaatcca
agtgaatgtgaggaggtggcaaatctttttagcaggattcttagtgcttattccaaggtg
cctcaaaagtcaatggtatcaccaacaaagagtgagtttgaggaactggaagaagtccca
agcatggttgttatgtatggtcctttggagccatcatcatcaactgcctctcatgtcaca
gacgttccagatgatccagcttttgtgaacttcttcagtacggctatgactattgtgact
tcttcaactacagcaattaccggacagccttaccagtcatcttcgacagtctctctacct
tctcgtccagtcggtgttgccccttcaagtattcctggcatgcaaataccatctgctcca
ctgttatcgtctacaactttagcctcttaccttgacctccctgaatcccgtaacaccacc
aacttggccagtaatcttgtaaagccatcttctttttttgttcatccttcctcttcagca
acaaccatgccacctgtctctgcatcaatccctgctgctcctcttcttcaacctgctgta
agtgtgcaacgtccatatggtgctcctcttttacaaccttttccaccgccagctcctcca
ccgtctctcactcctgcttctttcccgactccgaactatgggccagttaacagagataaa
gtacgaaatgcactcatgctgcttgtacaggataatcaattcattgacatggtatacgga
gcactccagaaggcaccccactcgtaa
DBGET
integrated database retrieval system
