Pyrus x bretschneideri (Chinese white pear): 103963931
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Entry
103963931 CDS
T03446
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103963931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103963931
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103963931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_8
F-box-like
DUF6195
F-box
DUF4239
DUF4559
Motif
Other DBs
NCBI-GeneID:
103963931
NCBI-ProteinID:
XP_009375118
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MDSQRKKVLEQVLNLVTSPKDRSSVSLVCKDWYDVERHSRRHVFIGNCYSVSPEIVTRRF
PNIRSVTLKGRPRFSDFNLVPPNWGGDVRPWLEVFAAEYPQLEELRLKRMTVSDESLEFL
AASFAGFKALSLLSCDGFSTDGLEAIATDCKNLTELDIQENDIDDKSGDWLSCFPETFTS
MEILNFSCLNSDVDFDALESLVSRCKSLKVLKVNKTVTLDQLRNLLTHAPQLLELGTGSF
WQELTPSQHSELERGFSNCKNLYAVSGLWQATALYLPVLYPVCTNLTFLNLSYAATLQSW
DLAKLVPYCPHLRRLWVLDTVEDQGLEAVGSNCPLLEELRVFPSSPDGDDIVDGVTGSGF
VAVSNGCPRLRYVLYFCWQMTNAAVATVAQNCPDITHFRLCIMTPAKPDHLTGEPMDEAF
GAVVKTCTKLERLSVSGLLTDLTFEYIGKYAKNLEYLSVAFAGDSDQGMQYVMNGCPKLK
KLEIRDCPFGDAALLSGLEKYESMRSLWMSACLVTMNACRSLASKVPRLNVEVMKDDEIG
DDSQADKVYVYRSIAGPRKDAPAFVLTF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaaagaaagaaggttctggagcaggtgctgaacctggtcacgtcacccaag
gaccggagctccgtctcgctggtctgcaaggactggtacgacgtggagcgccactctcgc
cgccacgtcttcattggaaactgctactccgtgtcgccggagatcgtgacccggcggttt
cccaacatccgaagcgtgaccctgaaggggaggccgcggttctcggacttcaatctggtg
cctccgaattggggcggcgacgttcggccgtggctggaggtgttcgctgctgaatacccg
cagctcgaggagctgaggctgaagaggatgacggtgagtgatgagagccttgagttcttg
gctgcttcttttgctgggttcaaagctctgtcgctgctcagctgtgacgggttcagcacc
gatggccttgaagccattgccactgactgcaagaatttgactgagctcgacatacaggaa
aacgacatcgatgataaaagtggagactggttaagctgcttccctgaaaccttcacgtca
atggaaatcctaaacttttcctgcctgaattccgatgtcgacttcgatgctcttgagagt
cttgtaagtaggtgcaaatcactgaaggtgttaaaggttaataaaactgtaaccttggac
caactacgaaatcttctcacccatgctcctcaacttctggagctaggcaccggctcgttc
tggcaagagctcacaccctctcagcattcagaactcgaaagagggtttagcaattgcaag
aatttatatgcagtctctggtttatggcaagcaacagctctttatctcccggttctgtat
cctgtctgtacgaatcttactttcctgaatttgagctatgcagcaactttgcaaagttgg
gaccttgctaaacttgttccttattgtccacatctccggcgcctttgggtgctggacaca
gtggaagaccaagggttggaggctgttggatcaaactgtcctttgcttgaggaactccgt
gttttcccttcttctcccgatggagatgatattgttgatggggtgactggctctgggttt
gttgctgtgtccaatggctgtccaagactccgctatgtcctctacttttgttggcagatg
actaatgccgctgtagcaactgttgcacaaaactgccctgatataacccacttccgtctc
tgcataatgaccccagcaaaaccagatcacctgacgggtgagcctatggatgaggctttt
ggtgcggtggtgaagacttgcactaaactcgaaaggctttcggtttcaggtttactgact
gaccttacatttgaatacattgggaaatatgccaagaatttggaatacctttcagtagcc
ttcgctggagacagtgatcaggggatgcagtacgtgatgaatggttgccccaagctcaag
aaacttgagatacgggactgcccgtttggggacgcagctttgctctcaggtttagagaaa
tatgaatctatgaggtcactttggatgtcagcctgccttgtgacaatgaatgcctgtcgg
tcattggcaagtaaggtgccgaggttgaatgttgaggtgatgaaggatgatgaaattggt
gatgacagtcaggctgataaagtctatgtttaccgttctattgccgggccaagaaaggat
gccccggcttttgttctcaccttctga
DBGET
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