Pyrus x bretschneideri (Chinese white pear): 103963970
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Entry
103963970 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103963970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103963970
03009 Ribosome biogenesis [BR:
pxb03009
]
103963970
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103963970
Spliceosome [BR:
pxb03041
]
Complex A
U1 snRNP components
U1 related factors
103963970
Complex B
103963970
Ribosome biogenesis [BR:
pxb03009
]
Eukaryotic type
Pre-60S particles
Helicases
103963970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103963970
NCBI-ProteinID:
XP_009375127
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAATATAAGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYDRPTSSAPPSKPSS
AQSISSSVHVQQSSQGQRRPDEGDDRYSRGSNGGSKFDTGSRTQQTARSATVSHNTPSGT
LSSHGGSSVKGNGSDTGSGLSAEAYSLRHEISVVGDNVPPPFTSFESTGFPSEILREVQS
AGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLLPGFIHLKRTRNNPQMGPTVLV
LSPTRELATQIQDEAVKFGKSSRISCVCLYGGAPKGPQLRDIDRGADVVVATPGRLNDIL
EMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEIPARRQTLMYTATWPKEVRKIAAD
LLVKPVQVNIGNVDELVANKSITQYVEVLTSMEKHRRLEQILRSQEPGSKIIIFCSTKKM
CDQLSRNLTRQFGAAAIHGDKSQSERDYVLNQFRSGRTPILVATDVAARGLDIKDIRVVI
NYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQRVPPEIREL
ASRGGGMNRFRRWGSGPSGGRDGGRGQNDSSYGGRDGGRGGGYGFTPSSGRYGQSNGYDR
GRSPSPVKASGYRARSRSPERFDKALPTGGGSAGGWSFHKAMMERERSSPPRRRNAEEAE
EGMIHPE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcaactgctgctggtcctcgatatgctccggaggacccaactctcccc
aaaccatggagaggtctggttgatggtaaaactgggtatctttacttctggaacccggag
accaacgttacccaatatgataggccaacgagctcagcacctccatcaaagccctcttct
gcacagtctataagttcctcggttcatgttcaacaatcttcgcaagggcaacgtcgtcct
gatgagggagatgataggtatagcagaggcagcaatggtggctcgaaatttgacacagga
tcaagaactcagcagactgcaagaagtgcaacagtttctcataataccccaagtgggaca
ctaagttcacatggaggatcttctgtgaaaggaaatggatcagacactggaagtggtttg
tctgctgaggcttatagtctccgccatgaaatatcagttgttggtgataatgtgcctcca
ccattcacttcatttgaatctactggcttcccatctgaaattcttagagaggtacaaagt
gctggtttctctgccccaactccaattcaagcacaatcttggccggttgctcttcaaagt
agagatatagtagccattgctaaaactggttcggggaagaccttggggtatttgcttcca
ggatttatccatctcaagcgcacccgtaataaccctcagatgggtccaactgtattggtt
ttatcaccaactagggagctggcaacacagattcaagatgaggcagtgaagtttgggaag
tcatcaaggatatcttgtgtgtgtttgtatggaggagctccaaagggaccacagttgaga
gatattgaccgaggagcagatgttgtggttgccactcctggccgcttgaatgatattctt
gaaatgaagagaatcagtcttcatcaagtttcttatttagtgctggatgaggctgaccgg
atgctggacatggggtttgaaccacaaataaggaagattgtgaaggagatacctgctcgt
cgccagaccctaatgtataccgcaacttggccgaaggaggttcgaaagattgcagcagat
ctactggtcaaacctgttcaggttaacattggcaatgttgacgaactggttgcgaataag
tctatcacacagtacgttgaagtactgacctcaatggagaagcacagacgactggagcag
atattgcggtctcaagagccagggtctaagataattatcttttgttcgaccaagaagatg
tgtgatcaactttctcgcaatctaacccgccagtttggagctgctgcaattcatggcgac
aaatctcagagtgagagggattatgtgttgaatcaatttcgttctgggaggactccaatt
cttgtagcaactgacgttgcagctcgaggattggacatcaaggacataagggtggttatc
aactacgacttccctactggagtagaggattatgttcacaggattgggagaactggaaga
gcgggcgccactggcctggcttatacattttttggtgatcaggatgctaagtatgcatca
gatctcatcaaagttttggaaggtgcaaatcagcgagtacccccagaaattcgtgagctg
gcttcccgtggtggtgggatgaacaggttcagacgttggggttctgggcccagtggtggt
cgtgatgggggtcgtgggcaaaatgattcaagttacggtggaagggatggtggaagggga
ggaggatatggatttactccctcttctggcaggtatggtcaatctaatgggtatgacaga
ggccgcagtcccagccctgtcaaggcgtcgggatatagagcccgtagccgtagtcctgag
aggtttgacaaggctctgccaacaggtggtggctctgcaggtggatggagtttccacaaa
gcaatgatggaaagggagcggtcatcgcctccacgtagacgcaatgctgaggaagctgag
gagggaatgatacatccagagtaa
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