Pyrus x bretschneideri (Chinese white pear): 103964066
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Entry
103964066 CDS
T03446
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103964066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103964066
03036 Chromosome and associated proteins [BR:
pxb03036
]
103964066
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103964066
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103964066
PBAF complex
103964066
GBAF(ncBAF) complex
103964066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103964066
NCBI-ProteinID:
XP_009375229
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MNNNNDQSKNVGVPPHFGNSGPVPQPMAMNHQPNLLTQSQPPTQGGAHFPGHFQLSEPQA
QALAQAQYVNAHAQAQTQAAHAQFVQLQAQAQSRSQLHNANTSNAAASSPSLATPSTGTA
KRANQRPPARPPGSSSANTGSPFKTMELTPAASRKKRKLPDKQIPDKVAALLPESGLYTQ
LLEFEARVDAALARKKMDIQESLKCPPRVQKTLRVYVFNTFANQTQTNPEKTNAEPPSWS
LKIIGRLLEDGQDPVVVGLTPKSRAKFSSLFKKVTIYLDQTLYPDNQVILWESSRSPALH
DGFEVKRKGDKEFTAILRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIGAIWHYVKARK
LQNPNDPTFFVCDPPLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHKIKLSGNCPAGT
TCYDILVDVPMILEKEMSAFLGSTEKSKEIDGCDELICASIKKIHEHRRRRAFFLGFSQS
PAEFINTLIASQSKDLRLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPG
ST
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatgatcagtccaagaatgtgggcgtgccacctcactttggcaattct
gggccggtgccgcaacctatggccatgaatcaccagcctaatcttctcactcaatcgcag
cctccgacacaagggggagctcattttccgggacactttcagttgtctgagccgcaggcg
caggcacttgcacaggcgcagtatgtgaatgctcacgcacaagcccaaactcaagctgcc
catgcccaatttgttcagttgcaagctcaagctcagtcacgttcccagttgcataatgca
aatactagtaatgctgctgcttcatcaccctctttggcaacgcctagcacaggaactgct
aagcgggcgaaccagaggccgcctgctcggcctccaggttcatctagtgccaacacgggt
tcaccatttaaaaccatggagctcaccccagctgctagtagaaagaagcgaaagctacct
gataaacaaataccggacaaagtggctgcacttctgccagaatctggtctttatactcag
ttgcttgaatttgaagctcgtgttgatgctgctttggcaaggaagaagatggacatccag
gagtcccttaaatgtcctccccgtgttcaaaaaacacttagagtatatgtattcaacacc
tttgcaaatcagacacaaacaaatcctgagaagacaaatgcggaacccccttcatggtca
cttaagataattgggaggttactggaagacgggcaggatcctgtggtggttgggttgact
ccgaaatcaagggcaaaattttcatccctgttcaagaaagttaccatatacttggaccaa
accctctatccagataaccaagtgattttatgggaaagttcccgttcacccgctcttcat
gacggctttgaggtgaaaagaaaaggggataaggagtttactgcaatactaagactagag
atgaattatgtacctgagaaattcaaactttcaccggccctccatgaagttctgggaatt
gaggtagagacccgacccagaattataggtgctatttggcactatgtcaaggccaggaag
ttgcagaacccgaatgaccctacgttctttgtgtgtgatccaccacttcagaagattttt
ggggaagagaagatgaagttttcaatggtttcacaaaagatatcacagcatttaacgcca
ccacagcctatacatatagagcataagataaaactttctggaaattgtccagctggaact
acttgctatgatatactggttgatgtacccatgatattagagaaggagatgtctgcattc
ttgggaagcaccgagaagagcaaagagattgatggttgtgatgaattgatatgtgcatcc
ataaaaaaaatccatgaacatcgacggcggcgggctttctttcttgggttcagtcaatct
cctgcagagttcattaataccttgattgcttcccagagcaaggatctaaggcttgttgct
ggagatgctagccgtaatgcggaaaaggagcgccgttctgatttctataatcaaccctgg
gttgaggatgctgttattcgttacctgaaccgaaagtcagccggaagtgatgctcctgga
agcacttga
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