Pyrus x bretschneideri (Chinese white pear): 103964206
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Entry
103964206 CDS
T03446
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103964206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103964206
Spliceosome [BR:
pxb03041
]
Complex A
Other components
Complex A specific factors
103964206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Ras
Motif
Other DBs
NCBI-GeneID:
103964206
NCBI-ProteinID:
XP_009375385
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MTAKVGAASAVEPRITEMSGTTMTPASSAGTQKVSMFAAKAGFVIPKNKLSGSLVPVFRG
SKTLGAGDAVSGESKKQIQRKTKWGPDLTQDASVKKGRALAYQTRVDQITQQLNSGMLED
ENDEDLLSAPQDPHHKSSKHQIDTNDVNQLELEKREAIGEILKLNPSYKTPPEYKPLLKE
ATVPIPVKEYPKYNFVGLIYGPGSDNQKQLEKETGAKIQVYGTKAGTGQKAEIKPSDGSE
IHGEYENLYVHISADTFEKVDAAVAVIELLVTSVSGNLAAVSSTGASVSADNAHVPSQVQ
DTTTSNMVPTTVVNQGMVQPLPGLAQSPLEGQFQYPGPFFLRGPSSAPMNMPGFTPLNSS
RPVLNNPSHLSTSPFNPAYLPSSLGLPPSLVSPRQNPPTTHFLPHAYMAPQPASVQTNVS
APLTFIGNRPLPAGSSTGWSSSPPAPQPGFASMPPPSNISMANMVSSLNHPIAAPSFISF
PRPQAGLPSTSLSTSLQARIPSSVSESVPNFAPLKPPMMTAQSPGDFTFQPHRPQNPSFQ
TVPQPSSHFSAHNASLARPMLPSPAPQAPSFQFPQPGSQVLSRPQLGDHVGQHPSAHISA
APYARNSTAISVPPRLATFLESSTVLPRTPHPPMRPSNFNPPHQMPNLPGPLPPRPGNYI
QLQQNYPAHATRPEIPRASNQQFSSNLAFTSGKSASGPGGGQQLYDPFSPTSANQQQGGN
PGKM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaggttggcgctgcatccgcagtcgaacctcgcattactgagatgtctggt
acaacgatgacacctgcatcatcagctggtacacaaaaggtctccatgtttgctgccaag
gctggatttgttataccaaaaaacaagctgtcgggatcacttgtgcctgtctttcgcgga
agtaaaaccctaggagccggtgatgcagttagtggagaaagtaagaaacagattcagagg
aaaactaaatggggccctgatctcacccaggatgcttctgtcaaaaagggaagagcttta
gcttatcagactcgggtggatcaaattacacaacagctgaactctggaatgttagaggat
gagaatgatgaggacttactatcagcacctcaagatccgcaccacaaatcctctaagcat
caaattgacacaaacgacgtcaaccagttggaacttgaaaagcgggaagccataggtgag
atattaaagttaaatccaagctacaagaccccacctgagtataaacctttgttgaaagag
gctacagtccctattcctgtgaaagaatatcctaaatacaattttgttggcctaatatat
ggtcctggaagtgataaccagaaacaattagaaaaggaaaccggagccaagattcaagtc
tatggtaccaaagcagggacaggacagaaggctgaaataaaaccatctgatggaagtgaa
atccacggtgaatatgaaaacttatatgttcatatatcagctgacacatttgagaaagta
gatgcagcagttgctgtaattgaactgttagtcacctctgtatcaggaaatctggcagcg
gttagcagtacaggtgcttcagtttctgctgataatgctcatgttcctagtcaagtccag
gacactacaacctctaatatggttccgactactgtggtaaatcagggaatggtacaacca
ctgccaggacttgcacaaagtccactggaagggcagtttcagtaccctggtccatttttc
ctaaggggcccatcttctgctcccatgaatatgcctggcttcactccactgaattcttcg
agaccagttctcaataatccttcccatctttcaacttcacctttcaaccctgcatacctg
ccttcatcattgggtcttccgccatctcttgtttcccctagacaaaatccaccaacaaca
cattttttgccgcatgcatatatggctccccagcctgcatcagttcaaactaatgtttca
gctccactcacattcataggaaaccgaccattgcctgctgggagctctactggatggtca
agcagtccaccagctccacaaccaggttttgcgtccatgccaccaccttcaaatatatca
atggcgaatatggtgtcttctctaaaccatcctattgcagcaccaagttttatttctttt
ccacggcctcaagcaggacttccttctacatcgctatccacatctctgcaagcaagaatt
ccaagttctgtttctgaaagtgttccaaatttcgctcccctaaaaccaccaatgatgacg
gctcaaagccctggcgatttcacttttcagcctcatcgaccacagaatccatccttccaa
acagttccccagccaagcagtcacttttcagcacacaatgcttctcttgccagaccaatg
ttgccatctccagcacctcaagcaccgtctttccagtttcctcagccaggcagtcaggtg
ttatcgagaccacaactcggtgaccacgtgggtcagcatccatcagctcatatttctgct
gctccctatgccagaaattcaactgccatctcagttcctcccagactcgcaacatttcta
gaatccagtaccgttctacctcggacgccacacccaccaatgagaccgagtaacttcaat
ccaccccaccagatgcccaatttgccaggtcctctgcctccaaggccaggaaactatatt
caacttcagcaaaactatcctgctcacgcaactcgacctgagatcccacgtgcttcaaat
caacagttcagcagcaaccttgcatttacctctggcaagtcggcgtctggtcctggagga
gggcaacaactgtatgatccattctcacccacttctgcgaatcaacagcagggaggtaat
ccaggaaagatgtga
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