Pyrus x bretschneideri (Chinese white pear): 103964230
Help
Entry
103964230 CDS
T03446
Name
(RefSeq) uncharacterized protein LOC103964230 isoform X1
KO
K24155
rabconnectin-3a
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103964230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103964230
Membrane trafficking [BR:
pxb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103964230
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
103964230
RAVE complex
103964230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
103964230
NCBI-ProteinID:
XP_009375416
LinkDB
All DBs
Position
Unknown
AA seq
2560 aa
AA seq
DB search
MPDADAPSASQTSISAAGPTHHLPLQILRSDPTPPAPTRSDPPGSTIDWLPDFLEFSWVA
YGASSLLVISHFPSPLSDTETLIGPIFRQVFELSGDPSSAVEAVSWSPATPSIGELAAAA
ENCVWVFSHDSATSKGSFCWSQNAVLVQSTKVKAIRWTGSGDGIISGGVEVVLWKRNGRF
WEIAWKFKAELPQSMVTATWSLDGPFATAAYQSKWQTEGLSTNKASKCVLVCQSDGKSGF
LKSELHHPHAVSLIQWRPSTGRHLNRDAKHPPRQLLLTCSTDGTVRLWCEVDEGRGRKFG
KDMNDPKTMRWSFSVAAVIEINQALNGLLGTDIYVMWATEIGGVCKTSEGAKQIFSTKGY
LQDQAGNCEWIIGFGPGMLVNLWAIHCLDDVSPVRFPRVTLWKTQKLQGLKVGHSNWTGL
SNCKDGIPLDKVVISRNCLSGPPTLCSSVHLLPCNSLVWSQIHTQMSNNIEDAPVNKSGV
ENILSCSAGGLLNLDGHAGRILQVDVHPYSCEVELAVSLDSCGLLLFWFFSTISNCILDR
PTLIPTWELCGKLATQGSCSKYTSLRWAPSIGNEAVILLMGHAGGIDCFVVKVHHNEEES
IECHYLCTIPFTGHGPFVDGPASIFSIPLPSTCPKTLKSNKFLLLGVWMNGFQALSWEIT
LHSFDLSRSYCECNFDAGNASEGSMWGFETTFADKRYCLNVKPCSSQIPDPHMHDEVTSF
AVVYPGRKISMEKNLASIIDRCCPPYIMATGCSDGSLKLWRSDMDKPSTPHIPWELVGKF
QAHQGPISHVCLSDCGGKIATLWKELSSNTVSTLHIWDSVLLAGAGSFMLEGTISFGQDL
VALNWLSFGNGQLLLGVCTKNQLQVYSQQRYGGQTLLNSEKSLKTDIWVCIASTHTFPPI
NDFFWGPRLSAVFVHSSYFCVNSQWLFLADKKHLVNVDPSYIMENCLDSVRGMEEDISSG
IFIDCALGQFSKILLDDNRGDCKSRIPLEIDLKKDYLSSSLFVARAQLKCSGATKVGIWT
MHDVVEQLSGSLPVYHPEALFMNIYSGNWKRAYIALRHLNEFLSSNSSPERKCSPAKSSH
CIPQIPLSNFFDAHISINSNDKGFKWSGDASVFTSSSPFQIGFGQSTYGLDSYGSSNMIN
SSSTKSELNDFIEPFEKLYKSAAISDIEKIQILSIIDLLTELCSSNSSSAYESLDEPGRR
FWVGLRFQQLHFFRKSGRSASVEELVIDSKLIGWAYHSDCQENLFGSFLPNDPSWQEMRN
LGVGFWFTNTAQLRSRMEKLARLQYLKRKDPKDCALLYIALNRIQVLSGLFKISRDEKDK
PLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGGDTSSAVNICAKNLGDEQ
LALVICRLAEGRGGPLERHLITKFMLPSAIEKGDCWLGSLLEWELGNYSQSFTCMLGFQI
NSATEKYALLSNGAPFSDPNVGLYCLMLATNNCMKNAVGEQNSALLGRWAILTTATALNR
CGLPLEALEYLSSSPNIPGDTDERGTSDLGHSENLRAILNPSPRNSSNWLSSNVALHLEF
QAKSDLTLQYLSKLVREHPSWVHIVFGSFQDSTCVRECKNQEYVKVLESFQQKLYTTLNQ
LEQKFSVVPFHLVSMILISLYDYGLWFVGYDILHRYTAQNQDLDKIQTADKFLSYALMHK
PLLKATRETSLLFSRVIVACGITCSVLKSPYIEDKVSGDSRSTGSDALEYYFQGLILLLR
SLRAALGTTFCSITEDLIMEPLTIIDLIEYYVHLAYAWRHRNSKVLLLLVQPLLITFTNG
HTPYEVDMMNMKKLLTQIPEVAVQNNVGLQVSQERNMTHLVPEDERWQIISVCLWQHISR
FMQHNLNMLSYNLDDGCFAGEPHRKYFSWAPSSASLDSDSSSLKELIGLVSLSLVKLLKP
TISQVASYHVKQLASLLQHKMDNGLRVTTLVWLEESNKSQPGALNEHLNQDNVKLDTIGE
RLESDMLWDACADPKIISESFAQEKVDLSHSLDHKPSNGWGTINRGIGAADETEEIHHHE
VTLNSSSPNSEAGSPAKSVFRGGHSFLGAWQKDTTITKEVTPFLNPKEIYKRNGELLEAL
CLNSIDQSQAALASNRKGIIFFNWKNDMPFRDQSDYIWSLADWPPNGWAGSQSTPAPTCV
SPGVGLGSKKGAHLGLGGATVGVGSFARPGRDLTGGGAFGVPGYAGMGASGLGWETQEDF
EELVDPPATVENANTRAFSSHPSRPFFLVGSSNTHIYLWEFGKDKTTATYGVLPAANVPP
PYALASISALQFDHCGHRFATAALDGTVCTWQLEVGGRSNIGPTESSLCFNSHASDVAYV
TSSGSIIAVAGYSSNGVNVVIWDTLAPPTTSRASILCHEGGARSLAVFDNDIGSGSVSPL
IVTGGKGGDVGLHDFRYIATGRSKRHRHSDKGEQVIKTSPNNDTHSENGTKFGEQNQNGM
LWYIPKAHSGSVTKISIIPNTSLFLTGSKDGDVKLWDAKKAKLVHHWPKLHERHTFLQPS
TRGFGGVVQAAVTDIKVVSHGFLSCGGDGTVKLVQLKDHI
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcagacgcaccctccgcgtcccaaacctctatctccgccgcgggccccacc
caccacctccctctccaaatcctcagatccgacccgacacctcctgccccgacccgatcc
gacccaccgggatccaccatcgactggctccccgactttctggaattttcatgggtcgcc
tacggagcctcatcactactagtgatctcccacttcccctccccactctccgatacagaa
acactcatcggacccattttccggcaggtattcgagctctccggcgacccctcatcggcc
gtcgaagctgtctcttggtccccagccacgccctcgattggcgagcttgctgccgcagct
gagaattgcgtttgggtgttctcgcatgactcggcgacgtccaaaggttctttttgttgg
agccagaatgcagtacttgtacagtcgacgaaggttaaggcaatcagatggacgggctca
ggggatggaattatttccggtggagttgaggtggttttgtggaaaagaaatggcaggttt
tgggaaattgcttggaagtttaaagcagagctgccacaaagtatggtcaccgcaacttgg
tctctcgatggaccatttgcaactgcagcttatcagagtaaatggcagactgaaggattg
tcaactaataaggctagcaaatgtgtgttagtatgtcaaagtgatggaaaatctggattt
ttgaaatccgagctacatcatcctcatgctgtctcattgattcaatggagaccatctacc
ggaaggcatttaaacagagatgcaaaacatccaccaaggcaattgttgctcacttgtagc
acagatggaactgttaggttatggtgcgaggttgatgaaggaaggggaagaaaatttggt
aaggacatgaatgaccccaaaacaatgagatggtcattttctgtagccgctgtaatagag
ataaaccaggctttgaatggacttctgggcactgatatatatgtgatgtgggctacagaa
attgggggtgtatgtaaaactagtgaaggagctaaacaaattttctccacaaaaggttat
ctgcaggaccaggctggtaactgcgagtggataattgggtttggccccggaatgttggta
aatttgtgggctatacactgtcttgacgatgtctcaccagtaagatttccacgggttact
ttatggaagacacagaaactgcaaggtctaaaagtgggacattctaattggactggactt
tctaattgtaaagatggaatacctcttgataaagtcgttatctcaaggaactgcttgtct
ggtccaccaacattatgctcttcggttcatttattaccttgtaattccttggtttggtca
caaatacatactcagatgtcaaataatatagaggatgcacccgttaataaatctggtgtg
gagaacatcttatcatgttcagctggtggactcctgaatttggatggtcatgctggaaga
atcttacaagtagatgtgcatccttatagctgtgaagttgaattggctgtctctttagat
tcttgtggattacttcttttttggttcttttctaccatttccaactgcatcttggaccgc
ccaacattaattccaacatgggagctttgtgggaagcttgcgactcaaggttcatgctcc
aaatatacaagcttgaggtgggcaccatcaatcggaaatgaagcagttattcttcttatg
ggacatgctggagggattgattgctttgttgtaaaagttcatcacaatgaggaagaaagt
atagaatgtcactacttatgtacaataccttttacaggtcatggtccttttgtggatggt
cctgctagtatcttttcaattcctttgccgtcaacttgtcctaaaaccctaaaatctaat
aaatttttgcttttgggtgtatggatgaatgggtttcaggctctttcttgggaaataacc
ttgcattcttttgatttgtcaagaagctactgtgagtgcaattttgatgcaggaaatgcg
tctgaaggcagtatgtggggatttgaaactacttttgccgataaaagatattgtcttaat
gtaaaaccttgctcatcacagatcccagatcctcacatgcatgatgaggttacaagtttt
gctgtggtctacccgggaagaaagatatctatggaaaagaatttggcttctattattgat
cgatgctgtcctccatatattatggctacaggttgctccgatggtagcttgaaattgtgg
aggagtgacatggataagccatcaacacctcacattccatgggaacttgtgggtaagttt
caggcacatcaaggacctattagccatgtatgcttgtctgactgtggtggtaagatagca
accctttggaaggagctttcttcaaatactgttagcactcttcatatatgggactctgta
ctcctagcaggtgcagggtcttttatgctagaaggtacaatatcctttggtcaagatctt
gttgctttaaattggctatcatttggaaatggtcagttattacttggagtttgcacaaaa
aatcagttgcaagtatattcccagcagcgttacggtggccagactttattaaactctgaa
aaatcattgaaaacggatatatgggtctgcattgcgtcgactcataccttccctcccatt
aatgatttcttttggggccccagattgtcagctgtgtttgttcatagtagctacttttgt
gtaaatagtcagtggttattccttgcagataagaaacatcttgttaatgtcgatccaagt
tacatcatggaaaattgcttggattctgtgcgtggaatggaagaggacattagttctgga
attttcattgattgtgcacttggtcaatttagtaaaatattacttgatgacaacagagga
gattgcaagtctcgtattccattggagattgatttgaaaaaggattatctttctagcagc
ttgtttgtagcaagggctcaactgaagtgtagtggggctactaaagtaggtatatggacc
atgcatgacgtggttgagcagttaagtggatctctgccagtttatcacccagaggctcta
tttatgaatatctattcaggaaattggaagcgtgcttacattgctctgaggcatcttaat
gagtttctctcttctaattcttctcccgagaggaagtgtagccctgcaaagtctagccat
tgcattccgcagattcctttgtcaaatttctttgatgcacatatctcaataaattcaaat
gacaaaggatttaagtggagtggtgatgcatctgtatttacgtcatcttctccgtttcaa
ataggctttggccaatctacatacggcttggactcttatggttccagtaatatgatcaat
tcttcctcaacaaaatctgaactcaatgactttattgagccttttgagaagttgtacaag
tcagcagctataagtgacatagagaagattcaaattctttccattatagatctacttact
gaattgtgtagttcaaactctagttctgcatatgaaagtcttgacgaacctggacggagg
ttttgggttggattgaggtttcagcaactacattttttccgaaagtctggtagatcggca
tccgtggaagagttggtaattgactccaagttgattggatgggcgtaccactctgattgc
caggagaatttatttgggtcgtttctacctaatgatccatcttggcaagaaatgcggaat
ttgggtgtaggattttggtttacaaatacagcacagttgcgttcaaggatggagaaactg
gcaagattgcagtatctgaaaaggaaagatcctaaagactgtgcattgctgtacattgca
ctgaatagaattcaagttttgtctggccttttcaaaataagcagggatgagaaggataag
ccccttgttggatttctttcacgcaattttcaggaggagaaaaataaggcagcggctttg
aagaatgcatatgtcttaatggggagacatcagctggaattagcaattgctttctttctg
cttggaggtgatacttcttctgcagtcaatatttgtgcaaagaaccttggggatgaacag
cttgcattagttatctgtcgactagctgagggtcgtggtgggccactagagagacactta
attacgaagttcatgctaccatccgcaattgagaagggcgactgttggttgggaagcctt
ttggagtgggagctgggaaattactctcaatcttttacatgcatgcttggtttccaaata
aattctgcaactgaaaagtatgcacttttgtccaacggtgctcctttttcagacccaaac
gttggtctgtattgtctaatgctagcaaccaataattgcatgaaaaatgccgttggggag
caaaatagtgcattactcggaaggtgggcaatattgactacagctactgcattaaacaga
tgcggtcttccacttgaagctttggagtacctttcgtcttcaccaaacattcctggggat
acagatgaaaggggtacgtcagatcttgggcattctgaaaatctgcgtgcaattctaaat
ccttctcccagaaattctagcaattggttatcgagtaatgtggctctccatctggagttc
caagccaaatcagatttgacacttcaatacttatcaaagttggtaagagagcatccaagc
tgggtgcatatcgtctttggatcttttcaagatagtacatgtgtaagggagtgcaaaaat
caggaatatgtaaaagttcttgaatctttccaacagaagttatacacaacactaaatcag
ttggagcagaagttttcagtggttcccttccatcttgttagcatgattttaatctcgctg
tacgattatgggctgtggtttgttggatatgatatattacatagatacactgctcaaaat
caagatctagataaaatccaaacagctgacaaattcctatcatatgctcttatgcataag
ccgcttttgaaggccaccagagaaacttcccttttgttttcacgcgttattgttgcctgc
ggtataacatgctctgttctgaagtcgccttatattgaagacaaagtgtctggtgatagt
agatctacagggtcagatgctttggagtattactttcaaggtcttatactgttattgagg
agtttaagggctgctttgggaacgacattttgctccatcacggaagatctcatcatggaa
ccccttacaatcattgatttgatcgagtattatgtacatcttgcatatgcttggcgtcat
agaaactcaaaagttctcttactattggtgcaaccccttctgatcacatttactaatggg
catacaccttatgaagttgatatgatgaatatgaagaaactcctcacccagattccagag
gtggcggttcagaataatgtgggccttcaggtttctcaagagagaaatatgacgcatttg
gttccagaagatgaaagatggcaaatcataagtgtttgcttatggcaacacatatcccga
ttcatgcaacataacttaaacatgttgtcgtataaccttgatgatggctgttttgctggt
gaaccgcatcgaaaatatttttcatgggcacctagctctgcaagtttagattctgatagc
agcagtctgaaagaactgattgggctggtctcattgagcttagtaaagttattgaagccc
acaatttcacaggttgcctcttatcatgtaaaacagctagcatcacttctacagcacaaa
atggataatgggttgcgcgtaacgactcttgtttggttagaagaatctaacaagtctcaa
cccggagctctcaatgagcatctaaatcaggataatgtcaaattggacacgataggtgaa
agacttgaatctgatatgttatgggatgcctgtgctgaccctaaaataatatccgaaagt
tttgcccaggaaaaagtagacttgtctcactctcttgatcataaaccctctaatggatgg
ggtaccataaacaggggcattggagctgcagatgaaactgaggaaattcaccatcatgaa
gttacactcaatagtagttctcccaatagtgaagctggatcacctgctaaaagtgtattt
cggggtgggcattctttccttggtgcctggcagaaagacacaaccattacaaaggaagtc
acaccttttctaaacccaaaggagatatataagagaaacggggagcttttggaggcgttg
tgtctcaactccattgaccagagtcaagctgcacttgcaagcaaccgaaaggggattata
ttttttaattggaagaatgatatgcctttcagagatcaatcagattatatctggtcactg
gctgattggccaccaaatgggtgggctggttctcagtcaacccctgctccaacatgtgtt
tctcctggtgttggtcttggaagcaagaaaggagcacaccttggattgggtggagcaact
gttggcgtgggttcttttgcaaggccgggaagagatttgacaggtggtggagcatttggg
gttccaggttatgctggtatgggtgcatctggtttaggttgggaaactcaagaggacttt
gaggagcttgttgaccctccagctactgtggagaatgcaaatacgagggctttttccagt
cacccatctagacctttcttcttggttgggtctagcaatacacacatctacttatgggag
tttggtaaggacaaaacgactgcaacttatggagtgctgcctgctgcaaatgtccctccg
ccttatgctcttgcatcaatatccgctttgcagttcgaccactgtggacacaggtttgct
actgcggccttagatggaactgtgtgcacgtggcagctggaggtcggaggaaggagtaac
attggtcccacggagtcatctctatgctttaacagccacgcatccgatgttgcttatgtc
acttcaagtggatcaatcattgctgtggctggatatagctccaatggtgttaatgtggtg
atatgggatacattggctccacctacaacctcacgagcttctattctttgtcatgaaggt
ggtgcacgctctcttgctgtctttgataatgacataggaagtggctctgtctccccactt
attgtgactggtggtaagggtggtgatgtcggacttcatgatttccgttacattgctact
ggaaggagtaaaaggcataggcattcggataaaggtgaacaagtcatcaagacatcaccg
aataatgatacgcattctgaaaatggtaccaaatttggggaacaaaatcaaaatgggatg
ctttggtatataccgaaggctcactcagggagtgtgaccaagatatccataatcccaaac
acaagtttgttcttaacgggaagtaaagatggagatgttaagctttgggatgccaagaaa
gctaagttggtacatcactggcccaagttgcatgaaaggcacacatttttgcaaccaagc
actcgaggctttggtggagtagtccaggctgctgttacagatataaaagtcgtttcacac
ggttttctttcatgcggtggagacggcactgtaaagttagttcaactcaaagaccacatc
tga
DBGET
integrated database retrieval system
