Pyrus x bretschneideri (Chinese white pear): 103964432
Help
Entry
103964432 CDS
T03446
Name
(RefSeq) polyadenylate-binding protein 7-like
KO
K13126
polyadenylate-binding protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015
mRNA surveillance pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103964432
09123 Folding, sorting and degradation
03018 RNA degradation
103964432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103964432
03041 Spliceosome [BR:
pxb03041
]
103964432
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103964432
mRNA cycle factors
Stress granule specific factors
103964432
Spliceosome [BR:
pxb03041
]
Complex C
Other components
Complex C specific factors
103964432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
103964432
NCBI-ProteinID:
XP_009375641
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MAVNNSQKVVGGGPTAGGVPAASLYVGDLHPYMTEGQLEEAFKGFKGVTSVRLCRDTATA
TNRSLRYGYVNFTTPEEAIRAMEVMNHSMLHGRVIRVMWSHRDPDARKSGIGNVFVKNLS
ESINSVELEEMFKKFGRTLSCKLAMFEDGKSKGYGFVQFESEESAIAAIEKLNGTTAGNK
QLYVAKFVIKSDRVFPNPDVKYTNLYMKNLDPTLKEELVEEKFSEFGKTVSFAIAKDDHG
NSRGFGFVNFENPDDARRAMEGMNGSQLGSKVLYVARAQKKAEREHILRRQSEEKRKEQM
LKFKGSNVYVKNIDDDVSDEELVEHFSQCGTITSAKIMRDDKGISKGFGFVCFSTPEEGN
KAVNTFHGYMFRRKPLYVAIAQLKEERHAQLQLQYAQRMAGFVGPSTTVIPGGYPPFYYQ
APSGVVPQVPPRPGLMYQPLGLRPGWIPNGFVPTSGPAYQPPQVPVMPNAPRQHRQYRGR
MNGHMIPQGGAYITQLQQPTQLPHTAKDSNNQQRMGQAKYVANERQRDMNKGVSSAASNS
VGVGVQPEMLSSMLAAASPEQQKQILGEQLYPLVHKQKPDLASKITGMLLEMDNSELPNL
LESPESLTAKVEEAVQVLQISKTKVPNKENIHPCYLSAEVAVN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgttaacaattctcagaaggtggtggggggtgggccgacggcagggggtgtgccg
gcggcgtctctttacgtcggagacctccatccgtacatgactgaaggtcagctggaggag
gctttcaaaggcttcaaaggtgtcacgtccgtacggctctgcagggacaccgccaccgcc
accaaccgttctctccgctacggctacgtcaacttcaccacgcctgaagaagcaattcga
gctatggaggtgatgaaccattcaatgctgcatggaagagtgataagggtcatgtggtca
catcgtgatcccgacgcaaggaaaagtggaattgggaatgtgtttgtcaagaatttgagc
gaatcgattaatagtgtagagcttgaagaaatgtttaagaagttcggacgtactttgtct
tgcaagttggccatgtttgaagatgggaagagtaaaggttatggctttgttcagtttgag
tctgaggaatctgcgattgccgctattgagaagctaaatggcaccactgccggaaataag
cagctgtatgttgcgaaatttgttataaagagcgatcgggtttttcccaatcctgatgtt
aaatatacaaatttgtatatgaagaatttggatccaactctcaaggaagagcttgtggaa
gagaagttctctgaatttgggaaaactgttagcttcgcgattgcaaaggatgaccatggg
aactctagaggttttggttttgtgaacttcgagaacccagatgatgctagacgagcaatg
gaaggaatgaatggatcacaacttggctccaaggttctgtatgtagcaagggctcagaaa
aaggcagagcgcgagcatattttgcgtcggcagtctgaggaaaaacgaaaggagcaaatg
ttgaagttcaagggatcaaatgtgtatgtgaagaacattgacgatgatgtcagtgatgaa
gaactggtagaacactttagtcagtgtggaacgattacttctgcaaagattatgcgagac
gacaaaggaataagcaaggggtttgggtttgtttgcttttctacccctgaggagggcaat
aaagctgtgaatacttttcatggatacatgtttcgtcggaagccattgtatgtagctatt
gctcaactaaaagaggaaagacacgcacagctgcagcttcagtatgcacagcgtatggca
ggatttgtgggtccttccacaactgtcatccctggtggataccctcctttctactaccaa
gcaccctctggggttgttccacaagtgcctcctcgaccgggactgatgtatcaacctttg
ggtttgaggccaggatggatacccaatggctttgtacctacgtccggaccagcctatcaa
ccaccacaggttcccgtaatgccgaatgctccaagacaacataggcaatacaggggcaga
atgaacgggcatatgatcccacagggaggcgcatatataacacagttacaacagcccact
cagttgccacacactgcaaaagattcaaacaatcagcagcggatggggcaggctaagtat
gttgctaatgagcgtcaacgcgacatgaataaaggagtctcgtctgctgcttccaattct
gttggagttggggttcaaccagagatgctgagtagcatgcttgctgctgcttctcctgag
cagcagaaacagatacttggcgaacagctctacccactcgtccataaacaaaagcccgac
ctagcttcaaagataactgggatgctacttgaaatggacaactcggagctgccgaattta
ttggagtcacccgagtctttgactgcgaaagtggaagaagcagttcaggtgcttcagatc
tccaagacgaaagtacctaacaaagagaacattcatccatgttatctttctgccgaggtt
gcagtcaattga
DBGET
integrated database retrieval system
