Pyrus x bretschneideri (Chinese white pear): 103964536
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Entry
103964536 CDS
T03446
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pxb04131
]
103964536
Membrane trafficking [BR:
pxb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103964536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
SAP130_C
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
103964536
NCBI-ProteinID:
XP_009375750
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MASSPFEVEDTDEDFFDRLVNDDIDFTESVHKPVEKKEFVDDKAFSKLSISEAGPVGVVD
TGGNASLGVNGELGHEDGAVVEQLGVSQVPAVVKESESMKPDSRNEASALDNIADNRKGV
SLLDDRVDIRNAAGAWDDMADNRNEASALEDKAGNTNEAEALEDKGKEGSVNGTVNTSLA
SVGSGVKVAQWSSFNLDLNPSGEFGDVSGDPFVNLGDPDKLWAESNVTDSGLENSVPDLG
VSSYGQHQEGQRYGVVEGQNLDGQDLNTSLASVGSGVKEVQWTSFNSGFDPSGDFGDFSG
DPFANLGNTDQSWATSNVTDGALESSVAGVSSYGQQQGGQHYGAVKEQSTDGQELNSSQN
WDNLYPGWRYDPNTRQWYQLEGYDVNANTSADLNINANVQERVNVNSQTADNVFSDQKAD
VYYLQQQAQSVSQSAALGSKTSAVSGWNQHSNGSTVYPAHIIFDPQYPGWYYDTITQEWK
QLESSTPSFDQSTSVEYNQQYHNLNVENHGSDVANSDGSMSTYDQQNASMWDNQKVSASD
TISVTETQQYATQYFSTGHVTNSVNQQIAFNPSGSVALNQPASHGYDLSSGVQGFESFNP
AGNLSHHHHQAKEPNQVTRFSPANFDSHKPVQFLQQPIERGAQFSHEASAGRSSAGHPPH
ALVTFGFGGKLITMKDNSNIYGSQDSVGGLINVLNLMEVVVVDKTDVASFGNDGCAYFHA
LCQQSYPGPLVGGSVGSREVNKWIDDNIANCVTASMDIRKRDHSRLLFSLLKIGCQYYGK
LRSPFGTDVALKESDSPESAVAKLFASAKGSNEYGALMLQNLPSEAQSQATALEVQNLLV
SGRKKEALQCSQNGQLWGPALVIASQLGEQFYSDTVKLMALNQLAAGSPLRTLCLLIARQ
PADVFSNATTDSSLHNSMNVSQDSQQRTQIGANSMLDEWEENLAILTANRTKDDELVIIH
LGDCLWKERGQNTPAHICYLVAEANFEAYSDSARLCLIGADHLKYPRTYASPEAIQRTEL
YEYARVLGNSQFLLLPFQPYKLVYAHMLAEVGKVADALKYCQAILKSLKYGRAPEVDTWR
QLVSSLEERIRAHQQGGYGTNSAPTKLMGKLLTLFDNTAHRVVGGLPPPAPSTSQVIAQC
NEHAQQPGGSSLSNNQSTMAMPSFMPGPSPPNSQSTMAVSSFTPGPSVPNSQSTMAVSSF
VPGPSVLNSQSTMAVSSFIPEPSVPNTQSTMAMSPLMPSASMEPISEWTAKNNQLNVPNR
SISEPDFGRSPSKVDSSKKVESTKPQENASTSTGSSRFGFGIFQKTLGFVKRSRQAKLGE
KNKFYYDEKLKQWVEEGVEPPAKEAALPPPPPIAAFPNRMQDYNINDALETKSFPAVNGS
QIPSLMSPEPSSGIPLIPPSSNQFSARGRTGVRSRYVDTFNKGGGTTANLFQSPSLPSAK
PGDGPKPKIFVPAPVTSYEETVQTTGESTFEPTVTNNNPPKSFESAFSTPQTSTSSSMTM
QRFPSMDNIVQKRAGDMGNGNSYEPHESRRVASWSGSLNHASNPSMRNEIKPLGQSLGIS
PPSRIHSGAPPPMQFPSSGGSFGDDLQEVAL
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctccatttgaggtggaggatacagacgaggatttctttgacagattggtt
aatgatgacattgactttactgaatctgtgcataaaccggtagagaagaaagagtttgtc
gatgacaaagctttttcgaaattgagtatttcagaagcaggtcccgtgggagtagtagac
acgggcggcaatgctagtcttggggttaatggtgaattgggtcatgaagatggggctgtg
gtggaacagttaggtgtcagtcaggtccctgcagttgttaaagaaagtgagtcgatgaaa
cctgattctagaaatgaggccagtgcattggataatatagccgataatagaaagggggtt
agtctattggatgatagagtcgacattagaaatgcggctggtgcatgggatgatatggct
gataatagaaatgaggctagtgcattggaggataaagcgggtaatacaaatgaggctgag
gcattggaagataaagggaaggaaggttcagtgaatgggacggtgaatacaagtttggca
tcagtgggatcaggagtgaaagtagctcaatggagttcgtttaacttggatttgaatcct
tctggtgaatttggagatgtttcaggggacccatttgtaaatttgggtgatccagacaaa
ctgtgggccgagtctaatgtcactgatagtggtttggagaactcagttcctgatttaggt
gtttctagttacgggcagcaccaagaaggtcagcgctatggggttgttgagggacaaaat
ttagatgggcaggacttgaatacgagcttggcatcagtgggatcaggtgtgaaagaagtt
caatggacttcatttaactcaggtttcgatccttctggtgactttggagatttctccgga
gacccatttgcaaatttgggtaatacagatcaatcctgggccacgtctaatgtcactgat
ggtgccttggagagctcagttgctggtgtttctagttatgggcagcaacaaggaggtcaa
cactatggggctgttaaggaacaaagtacagatgggcaggagttaaatagtagccagaat
tgggataacctttatccgggatggaggtatgatccaaatactaggcaatggtatcagttg
gagggttatgatgtgaatgcaaatacaagtgcagatttgaacattaatgcaaatgttcag
gaaagggtaaatgtgaattctcaaactgcagacaatgttttttcggaccagaaagcagat
gtttattatttacagcaacaagcgcagtctgtttctcaaagtgcggctctgggatctaaa
actagcgctgtttctggctggaaccaacattctaacgggagcacagtctaccctgcacat
ataatttttgatccacaataccccgggtggtactatgacacaataacccaagaatggaag
cagttggagtcttcaactccatcttttgaccagtcaacaagtgtggagtataatcagcaa
tatcacaatttaaacgtggagaatcatggttcagatgttgcaaactcggatggctctatg
agcacctacgatcagcaaaatgcgagcatgtgggataatcagaaagtttctgcaagtgac
actattagtgttactgagacacagcagtacgcgacccagtatttctcaactgggcatgta
accaattctgtgaatcaacaaatagcgttcaatccttctggatccgttgctcttaatcaa
ccggcaagtcatggctatgatttaagtagtggggttcaagggtttgaaagctttaatcct
gctggaaacttatctcatcatcatcatcaagctaaggagccaaaccaagtgacacgcttc
tcacctgctaactttgatagtcacaagccagtacaatttttacagcaaccaattgaaagg
ggagctcagttttctcatgaagcaagtgcagggaggtcatctgcaggacatcctccacat
gctttagttacatttggatttggtgggaaacttataaccatgaaagataatagcaatata
tatggaagccaggactctgtaggaggtttgattaatgttctcaatctgatggaagttgtt
gtcgtggacaaaactgatgttgcaagctttggaaatgatggttgtgcttatttccatgca
ttgtgccaacagtcataccctggccctttggttggggggagtgttggaagtagggaagta
aacaaatggatagacgacaatattgcaaactgtgtaactgcttctatggatatcagaaaa
agggaccattcgaggttgcttttctctttactaaaaataggatgccaatattatggaaaa
cttcgatctccctttggcactgatgtagcattgaaggaatctgatagtccggagtctgcc
gttgccaagctttttgcctctgctaagggaagcaatgagtatggtgctcttatgttacag
aacttgccttctgaagcacaaagtcaagcgactgctcttgaggtacaaaatcttcttgtc
tctggtaggaagaaagaagctttacaatgttcacagaatggtcaattgtggggtccagca
cttgtcattgcatcacagcttggtgaacagttttatagcgatactgtgaaacttatggca
ctaaaccagttagcagcaggatcaccattgcggactttgtgcttattaattgctaggcag
cctgcagatgtgttttccaatgccactacagatagcagcctacataattctatgaatgta
tcacaagattcacaacagcgcacacagattggagccaattccatgttggatgaatgggaa
gagaatttagccatcttaactgctaacagaacaaaagatgatgagcttgttatcatccat
cttggagattgcctatggaaagaaaggggacagaacacccctgcacacatatgttatttg
gttgcagaagccaattttgaggcatattcagacagtgctagactgtgtcttattggtgca
gatcacttgaaatatccacgaacatacgccagtcctgaggctatccagaggacagaatta
tacgaatacgcaagggttcttggaaattctcagtttctcctactaccttttcagccgtat
aagcttgtttatgcccacatgttggcagaagttggaaaagttgcagatgctttgaaatac
tgtcaagcaattttaaagtctttgaaatatggtcgagcacctgaagtggacacatggaga
cagttagtgtcatcgctagaggagcggataagagcccatcagcagggtggttacggtaca
aattcagctccgaccaaactgatgggtaaattgctcacattatttgataatactgctcat
cgtgttgttggaggcctgcctccacctgcaccctcgacatcacaagtcattgcccaatgt
aatgagcatgctcaacaaccaggaggctcaagtctatccaataatcaatcaacaatggct
atgccttcgtttatgccaggcccaagtccacccaatagtcaatcaacaatggctgtgtct
tcgtttacaccaggcccaagtgtgcccaacagtcaatcaacaatggccgtgtcttcgttt
gtaccagggccaagtgtacttaatagtcaatcaacaatggccgtgtcttcgtttatacca
gaaccaagtgtacccaatactcaatcaacaatggctatgtctccgttaatgccttcagca
tcaatggagccaataagcgaatggactgccaagaacaatcaactaaatgtgcccaataga
agcatatcggaaccagactttgggagaagcccaagtaaggttgattcatccaagaaagtg
gaatctactaaaccgcaagaaaatgcatcgacatctaccgggtcatctcgttttggtttt
ggcatatttcagaagactctgggatttgtgaaaagatcccgacaggctaaattgggtgaa
aagaataaattttactatgatgagaaacttaagcaatgggttgaagaaggtgttgaacct
ccagccaaggaagcagccttgccacctccaccaccgattgcagccttcccgaatagaatg
caagattacaatataaatgatgcactggaaaccaaaagtttccctgcagttaatgggtca
caaatcccaagcctgatgtcccctgaaccgagttctggaataccactcattccacccagt
tccaaccagttctctgcacgtggacgtacgggcgttcgctcaaggtatgttgatacattc
aacaaaggcggcgggacgacagcaaacctatttcagtcaccatctcttccatctgctaaa
cctggggatggtcccaaacccaagattttcgtccctgctccagtaacttcctatgaagag
acagttcaaacaacgggagaaagcacatttgaacctacggtgaccaacaacaatccccca
aaatcatttgagagtgcattttccactccacaaacgtcaacatcgtcttcaatgactatg
cagcggtttcccagtatggataacattgtacaaaagagagccggagatatgggaaatggt
aatagctatgagccccatgaatcccgccgcgtagcatcgtggagtggaagccttaatcat
gctagcaatccttctatgaggaatgaaataaaacctctaggacaatcgctcggtatttct
ccaccatcacgcatacacagcggtgcaccaccaccgatgcagtttccaagtagtggtggc
agttttggagacgaccttcaagaagttgcactctga
DBGET
integrated database retrieval system
