Pyrus x bretschneideri (Chinese white pear): 103965033
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Entry
103965033 CDS
T03446
Name
(RefSeq) uncharacterized protein LOC103965033
KO
K10756
replication factor C subunit 3/5
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03410
Base excision repair
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103965033
03410 Base excision repair
103965033
03420 Nucleotide excision repair
103965033
03430 Mismatch repair
103965033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxb03032
]
103965033
03036 Chromosome and associated proteins [BR:
pxb03036
]
103965033
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103965033
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103965033
DNA Replication Termination Factors
ELG1-RFC complex
103965033
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103965033
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103965033
Check point factors
HRAD17(Rad24)-RFC complex
103965033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
COMPASS-Shg1
RsgA_GTPase
RuvB_N
Motif
Other DBs
NCBI-GeneID:
103965033
NCBI-ProteinID:
XP_009376326
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MPSPSIISRSSSFPRLKKAWPSQYTLPENLPPANHSACTAPASKITSAKLSWRRKFRKLI
RKRRNSNFTEQSLEVHNNAHIVKDVNKLHKRVEQVSLQDYYNFEIDEERSSKYSPYYIRG
LTYPNFVVPKHPISTPGRESHTSHGSWNSISTFFSGFRMPEWSSCIGSKSKSNKLRPEMY
TAMKPLKPPVVNSSSSTITELSLVEEESRERKKVRTSSNESNKEKPLRKMRSGGAAAADV
DAPRNDQIKVMSEAEKEYAWADKYQPLCLEDFICNRDKATQLQALAKEGGCGHFIFEGPP
GVGKRTMIWAMLREVFGRDTIHAREEFKAFNLKGEMVGSIEVHVKQSPQHVEVNLSELKG
YEKHVIVELMKETRDNTLNKSMPCSLDNCRAIILYEADKLSTDALLYIKWLLERYKGCNK
IFFCCSDASKLQAIKSLCTVFELSPPSKNEIVEVLKFISKKEGIDLPHELAERLAQNSKN
NIRLAIRSFEATWKKSYPFKEDQVILTGWEDNIADIAKNMIEEQSPKQLYIIRGKLQNLI
VHGVSPEFIFKSLVAELKKYVDGSLQDRVDSMYDEYNRNDEYMFESDKALALSRHDHGET
GKRPAEQSVRHVQQFLRIEDLNVWFKFTF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcccgtcaatcatctcccgctcttcgtccttcccacggctcaaaaaagcatgg
ccttcgcagtacactctcccggaaaacctccctcctgcgaaccactctgcatgcacagct
cctgcgtcgaagatcacttctgccaagctttcctggagaaggaagttcagaaaacttatc
aggaagagacggaattcgaacttcacagagcaaagcctcgaggttcacaataacgcgcac
attgtgaaagatgtgaacaagcttcacaagagagtagagcaagttagtcttcaagactat
tataactttgagattgatgaggaaagaagctcaaaatatagtccctattacattagggga
ctcacgtatccgaacttcgttgtccctaagcatccaattagtactcccgggcgtgaaagc
catacctctcatggttcttggaactcaatctccaccttcttttcggggttcagaatgcca
gagtggagctcttgcattggttcaaaaagcaagagcaacaagcttaggccggaaatgtac
accgcaatgaaacccctcaaaccacctgtagttaactcctcatcatcgacaattacagag
ctttctttggtggaggaggagagcagagagaggaagaaggtcaggacgagtagcaacgaa
tctaacaaagagaagccattgaggaaaatgcgatcaggaggagcagcagcagctgatgtt
gatgcgccgagaaatgatcaaattaaggtgatgagtgaagccgagaaggagtatgcatgg
gcagacaagtaccagcctctgtgcttagaagatttcatatgcaatagagacaaagcaact
cagctacaggccttggccaaagaaggaggatgtggacatttcatatttgaaggaccgcca
ggagtggggaagagaacgatgatctgggctatgcttcgagaggtttttggacgcgacaca
atacatgccagagaagagttcaaggcattcaacctcaagggtgaaatggtaggtagtata
gaagtacatgtaaagcaatctcctcaacatgtagaagtgaatctctctgaactgaagggc
tacgaaaagcatgtgattgtcgaactcatgaaggaaacacgggacaatacactgaacaaa
tctatgccgtgcagccttgacaactgccgagcaataatattatacgaggcagacaagcta
tcaaccgatgccctgctgtatataaagtggcttttagaaaggtataaagggtgtaataag
atcttcttctgctgctctgatgcctcaaagcttcaggcaatcaaatcgctttgcacagtc
tttgagctttcacctccttcgaagaatgagattgttgaagttctaaaattcatatctaaa
aaagaaggcatagatttgccacatgaattggctgaaaggttagcccaaaattctaagaat
aatatccgtctagccattcgttcattcgaggctacttggaagaaaagctatccttttaaa
gaagatcaagtaattttgacaggttgggaagataatattgcagatattgccaaaaatatg
attgaagagcaaagcccaaaacagctatatataatccgcggaaagcttcagaatcttata
gttcatggcgtatctcccgaattcattttcaaatccctagtagcagagctgaagaagtat
gtggacggcagcctgcaggatcgagttgacagcatgtacgacgaatacaataggaacgac
gaatatatgtttgagagtgacaaagcgctggcactcagtcggcacgatcacggggaaacg
ggtaaaaggcccgccgaacaatctgtaaggcacgttcagcagttcttgagaattgaagat
ttgaatgtgtggttcaaattcacattctga
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