Pyrus x bretschneideri (Chinese white pear): 103965524
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Entry
103965524 CDS
T03446
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103965524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103965524
03036 Chromosome and associated proteins [BR:
pxb03036
]
103965524
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103965524
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103965524
PBAF complex
103965524
GBAF(ncBAF) complex
103965524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
103965524
NCBI-ProteinID:
XP_009376868
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MPASPSDSHGKWRKRKRDPQIRRNKREDDDDEDDDACAAADDDNELDPNDDSKDPQHNPP
SAAAPDPAPHETEVLDGGVRVSDFPPVVLRTVNRPHSSVLALVALERGYHSGGDTKGPAS
SILLENVSYGQLQALSAVSADSPALDPDRADGSVAAYVVTPPSIMEGHGVVKRFGNRVNV
VPMHADWFLPAAVHRLERQVVPHFFSGKSSDHTPELYMHCRNEIVAKYMENPEKRLAFSD
FPQLSGRLSTEDLTRIIRFLDHWGIINYCAEAPSHEPWNGSSYLREEVNGEIQVPSADLK
SIDSLIKFDKPRCRLKAAEVYSSLPCHDDDDVSDLDNTIRKRLSENHCNYCSCSLPNVYY
QSQKEVDVLLCSNCFHEGRYVVGHSSIDFIRMDSTKDYGDLDGESWTDQETLLLLEAMEI
HNENWNEIAEYVGSKSKAQCILHFLRLPVEDGLLENIEVPGMSLSSNSLDRDGHGGFHSS
SNGDAAGSCLQDADSDSRFPFANSGNPVMAMVSFLASSVGPRVAASCAHAALTVFSEDNG
VSASASIMEGSGHRTNSENIQGREGGAHGNSANLLQQKEKNSAAHGSWGQNEARAIPIPA
EKVKAAAKAGLAAAALKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMK
ECEQVEKTRQRMASERARIMSTQFRPAGASPMSSAGAXXXXXXXXXSAGAGPSMSNNNIG
NNRQQIMSSSGSQPSISGYSNNQPVHPRMPFMPRQPMLGLGPRIPLTSIQSSSAAPNATF
NSAGTAQSTLNHPLLRPVPGTSSGLG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcagactcacacggcaaatggaggaagcgaaagcgcgacccccaa
attcgccggaacaagcgcgaggacgacgacgacgaagacgacgacgcctgtgccgccgcc
gacgacgacaacgagctcgacccgaacgacgactcgaaggacccccaacataacccccca
tccgctgcagcacctgatcccgcccctcacgagaccgaggtcctggacggtggggtccgc
gtaagtgacttccctcccgtcgttttgcgcactgtcaaccggccccactcctccgttctt
gccctcgttgcgctcgagcgaggctatcattccggcggggacaccaaggggcccgccagt
tccattttattggagaatgtgtcgtacggtcagctccaggcgctgtccgccgtgtctgct
gatagtccggcgctggatccggaccgtgcagatggctccgtggcggcttacgtggtcact
ccgccttcgattatggaaggccacggcgttgtgaagcggtttgggaacagagttaatgtg
gttccaatgcacgcagattggtttttacctgccgcagtgcatcggttggagagacaggtg
gtgccgcattttttctcaggaaaatcatcagatcatactcctgagctatacatgcattgt
aggaatgaaattgttgccaaatacatggaaaatccagagaagaggcttgcattttctgat
ttcccacaattatctggtcgtctaagtactgaagatttgactcgaataatccgttttctt
gatcactggggaattatcaattactgtgctgaagcacccagtcatgagccgtggaatggc
agttcctacttaagggaggaagtaaatggtgagattcaagtgccatcagctgatcttaag
tccattgatagtttaatcaaatttgacaagcccagatgtaggctcaaggcagctgaagtt
tattcgtcattgccatgtcatgatgatgatgatgtctctgatttggacaacacaattcgg
aagcgtctatctgaaaaccattgcaattactgttcttgttctcttcctaatgtatactat
cagtcacagaaggaggttgatgtactgctgtgctctaattgcttccacgagggaagatat
gttgttggtcattcaagcatagatttcataaggatggattcaacaaaagattatggtgat
ctggatggggaaagttggactgatcaagaaaccctactgctgctcgaggcaatggaaata
cacaatgagaactggaatgaaattgctgagtatgttggttcaaagtcaaaagcacaatgc
atccttcattttcttcgtttgcctgtggaggatggcctgcttgaaaatattgaagttccg
ggcatgtccctgtcttccaattcattggatagagatggtcatggaggatttcattcaagt
tcaaatggggatgcagcaggatcctgcctacaagatgctgattctgatagtaggttccct
tttgcaaattctgggaatccagtcatggccatggtttcatttctggcctcctctgttggg
ccaagagttgctgcatcttgtgcccatgcagccttgactgtattttctgaggataatggt
gtatctgcctctgcaagtattatggaaggatcagggcataggacgaactctgagaatata
caaggtagagaaggcggtgctcatggaaattctgcaaatttacttcagcaaaaggaaaag
aactcagcagcccatggttcttggggtcaaaatgaggcaagggcgattccaatacctgca
gagaaagttaaagccgctgccaaagctggccttgctgcagctgcactaaaggcaaaattg
tttgctgatcacgaagaacgggaaattcagaggctatctgctaatattataaatcatcag
ttgaagagattggagctgaagttaaagcagtttgcagaagtggaaaccttcctaatgaaa
gaatgtgaacaagtggagaagacaaggcagaggatggctagtgaacgtgcccggatcatg
tcaactcagtttagacctgctggagcttcgcccatgagttcagccggggctnnnnnnnnn
nnnnnnnnnnnnnnnnnttcagcaggtgctggtccttccatgtccaataataacattggt
aacaataggcaacagattatgtcatcttcaggttcacagccaagcatatcaggatacagc
aacaaccaaccagtccatccccgtatgccattcatgccacgtcaaccaatgttagggttg
gggccgaggatacccttaacatccatacagtcatcctcagcggctccaaatgctacgttt
aattctgcagggactgcccagtcaacgctaaatcatccattattgaggcctgtaccaggt
actagctccggtttaggttga
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