Pyrus x bretschneideri (Chinese white pear): 103965631
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Entry
103965631 CDS
T03446
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103965631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103965631
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103965631
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
HECT type E3
103965631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
103965631
NCBI-ProteinID:
XP_009376978
LinkDB
All DBs
Position
Unknown
AA seq
1855 aa
AA seq
DB search
METRSRKRAEATSAAPSSSSSGRTTRSSKRARLSASSLSSVSPTPITTRSRASRTQNEPA
PAAPMDPTNESSGSRGRRREAERNLGLNMDAGGTGDDDDNDSEGGVGILHQNLTSASSAL
QGLLRKIGAGLDDLLPSSAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLS
IGTEESLSTFSVDSFVPVLVGLLNHECNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVS
CFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALST
AANMCKKLPLDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELC
NHGLVTHAASLISTSNSGGGQSTLSTPTYTGLIRLLSTCASGSPLGSKTLLLLGISGILK
DVLSGSGISSSTSVSPALSKPPEQIFEIVNLANELLPPLPQGTISIPSSFNVFMKGPVVK
KSSASGSGKQDDTNGTGSEVSAREKLLNEQPGLLQQFGMDLLPVLIQIYGSSVNGPVRHK
CLSVIGKLMYFSNAEMIQSLLSSTNISSFLAGVLAWKDPHVLVPALQIAEILMEKLPNTF
SKVFVREGVVHAVDQLILPGTPNSVPVPVSSAEKDSDPVPGTSSRSRRYRRRNSNSNPDG
NSLEETKSPPSANIGSPPSSVEIPTVNSSLRMAVSACAKAFKDKYFPSDPGAIEVGVTDD
LLHLKNLCMKLNSGVDDQKTKAKGKSKAFGSRLVDSSASKEEYMIGVVSEMLAELSKGDG
VSTFEFIGSGVVAALLNYFSYGYFSKERISEANLPKLREQALRRFKSFVAVALPFSINEG
SVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSTGSARLSSGLSALSQPFKLRLCRAQGE
KNLRDYSSNVVLIDPLASLAAVEEFLWPRVQRGESGQKPAVSAGNSESGTTPTGAGASSL
STSNPATTTHRHSTRSRTSVNIGDTARREPSQEKSASSSKGKGKAVLKPSQEEARGPQTR
NAARRRAALDKDVQMKPTNGDTTSEDEELDISPVEMDELVIEDDDISDDEDDDHDVLRDD
SLPVCMPDKVHDVKLGDSTEDATVASATSDNQTNPASGSSSRVATGRGSDSAEHRSSNSA
YGSKGAMSFAAAAMAGLGSASRGIRGGRDRQGRPIFGSSSDPPKLIFTSGGKQLNRHLTI
YQAIQRQLVQDEDDDERYAGSDFVSSEGSRLWSDIYTITYQRPDNQTDRASVGGASPTTA
TKSGKSGSASNSNSESQLHRMSLLDSILQGELPCDLEKSNPTYNILALLHVLEGLNQLAP
RLRAQIVSDSFAEGKVLNLDDLSTTGARVFHEEFINSKLTPKLARQIQDALALCSGSLPS
WCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGANEREVRVGRLQRQ
KVRVSRNRILDSAAKVMEMYSSQKSVLEVEYFGEVGTGLGPTLEFYTLLSHDLQRVRLGM
WRSNSSMEKTSMDVDGDEHKDGKSNGDIVQAPLGLFPRPWPPNAVASDGSQFSKVMEYFR
LVGRVMAKALQDGRLLDLPLSTAFYKLLLGQELDLHDILSFDAELGKTLQELRNLVCRKL
YLESNGDNRDAIVELRLRGVSIDDLCLDFTLPGYPDYVLKPGDENVDINNLEEYISLVVD
ATVKTGIMRQIEAFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWEAETLADHIKFDHG
YNAKSPAILNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTANN
AATNGTGVSELADDDLPSVMTCANYLKLPPYSTKEIMFKKLLYAISEGQGSFDLS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggccacctcagcagccccttcttcttcttcg
tctggtcgcaccactcgttcttccaagcgcgctcgtctctctgcttcttcattatcttct
gttagccccactccgattacgacccggtcccgcgcctctcgcacccaaaacgaacccgca
cccgccgcacccatggaccccacgaacgaatcgtccggctcgcgcggccgccgcagggaa
gctgagaggaacctagggttgaatatggatgcaggtggaactggcgacgacgatgacaat
gatagcgaaggcggtgttgggattttgcaccagaacttgacttcagcgagtagtgccctt
caggggcttcttaggaagatcggtgccggactggatgacctgcttccttcttcggctatg
ggttcagcttcgtcctcgcaccagagcgggaggctgaagaagattttatctgggttaaga
gctgatggggaagaagggaaacaggtggaagctttgactcaactgtgtgaaatgctttca
attggaactgaggagtcgttgagcacgttttcggttgattcatttgtgcctgtgcttgtg
ggattgcttaatcatgagtgcaatccggatattatgcttcttgcagctagagcactcact
catctttgcgatgtgcttccatcgtcttgtgccgccgtggtacattatggtgctgtttct
tgcttttgtgcaaggttgttgacgattgagtacatggacttggcagagcagtcactgcaa
gctctcaagaaaatatcacaagaacacccaactgcctgtcttcgagccggtgctcttatg
gcagtgctttcttatctggattttttctccacaggagtccagcgtgtggcattatcaact
gctgcgaatatgtgcaagaaacttcctttagatgcagctgactttgtgatggaagctgtc
ccattgttgacaaaccttctgcagtatcatgatgcaaaggttttggaacatgcttctgta
tgtctgacacgaattgctgaagcatttgcatcatctcctgacaaacttgatgaattatgc
aaccatgggctagttactcacgctgcgtcccttatttccaccagcaattctggaggtggt
cagtcaactctaagtacacctacttatactggtttaattcgactactatcaacctgtgca
agtggttcccctttagggtctaaaactttgcttcttcttgggatcagtggaattcttaaa
gatgtactttcaggttctggaatttcttctagcacatcagtttctcctgctttaagtaag
ccaccagagcagatctttgagattgtcaatctggcaaatgagctacttcctccattgcca
caaggaaccatttccattccatccagcttcaatgtatttatgaagggtcctgttgtgaaa
aagtcgtctgctagcggctctgggaaacaagatgacaccaatggaactggttctgaggtt
tcagctcgtgagaaattattgaatgaacagcctgggcttctccagcaatttggaatggat
ctccttcctgttttaatacagatttatggttctagcgttaatggccctgttcgccacaaa
tgtctttcagtaattgggaaattaatgtacttcagcaatgcagagatgatacagtcttta
ttaagttcaacaaatatttcaagtttcttagccggtgtcttagcatggaaagatccgcat
gtcttggttcctgctctccaaattgctgagatactcatggagaagcttcccaatactttc
tccaaggtgtttgtgagagaaggtgttgttcatgccgtggaccaactcatcttacctggt
actccaaattcagttcctgtcccagtatcttctgctgaaaaggatagtgatcctgttcct
ggaacatcatcacgttctaggcgttatagacgacgcaacagtaactcaaatccagatgga
aattcattggaagaaactaagagtcccccttcagcaaatatcggttcacctccaagttca
gtggagattcctactgttaactccagccttcgaatggctgtcagtgcttgtgctaaagct
tttaaagacaagtacttcccttcagatcctggggctattgaagttggagttacagatgat
ctattacatttaaagaatctatgcatgaagttgaattcaggtgttgatgaccaaaaaacg
aaagcaaagggaaagtcgaaagcttttgggtctcgcttggttgatagttctgcaagtaag
gaggagtacatgattggtgtggtatctgagatgctagccgaactaagcaaaggggacggt
gtatccacttttgagttcattggtagtggtgttgtggcagcattgctcaactatttttct
tatgggtacttctccaaggagaggatttcggaagctaatttgcccaagcttcgtgagcaa
gcacttagaagatttaagtcatttgttgctgttgctcttcctttcagtattaatgaagga
agtgtagcaccaatgactgtcctcgttcagaagctccaaaatgctttgtcgtccttagag
cgttttccagtcgtgctgagtcattcatctaggtcatccactgggagcgcacgcctctcc
tctggactgagtgcattatctcagccctttaagttgcgtctttgtcgagcacaaggagaa
aagaacctccgagactattcatcgaacgttgttctgattgatccattagctagtttagct
gctgtagaagagtttctttggcctcgagtacagcgaggggaatctggtcagaagcctgct
gtctctgctggaaactcagaatctggaactacacctacaggtgctggtgcttcatctctg
tctacctcaaatcctgctaccaccactcatcgccattcaacgcgatccagaacatctgtg
aatataggagatacagctaggagggaaccatcacaagagaagagcgcaagctcatcaaaa
gggaagggtaaagctgttttgaagccttctcaggaggaagcaagaggacctcaaacgaga
aatgcagctcgtagacgagcagctcttgataaagatgttcaaatgaagcccacaaatggg
gacactacttctgaggatgaggaattggatatatcacctgttgagatggatgaattggtt
attgaagatgatgacatctcagatgacgaagatgatgaccatgatgttctaagagatgac
tctcttcctgtttgcatgccggataaagtacacgatgtcaaattgggagactcaactgag
gatgctactgtagcttcagccacaagtgacaatcagactaacccagcttctggctctagt
agcagagttgctacgggtagaggctcagattctgctgagcataggagtagtaattctgct
tatggttcaaaaggtgcgatgtcatttgctgctgccgctatggctgggcttggatctgcc
agcaggggcattaggggaggcagagatagacaaggacgtcctatttttggcagttctagt
gatcctcctaagttaatttttacttctggagggaagcagcttaataggcatctgactatc
tatcaggctattcagagacagcttgtgcaggatgaggatgatgatgaaaggtatgctggg
agtgattttgtatccagtgaaggtagcaggctatggagtgatatttacactatcacatac
cagaggccagacaatcaaactgacagggcatctgtcggaggtgcaagtcctacaactgca
acaaaatctgggaaatctggctctgcttccaattccaactccgaatctcaattgcatcga
atgtcacttttggatagtattttgcagggagagcttccttgtgatttagaaaaatctaat
cctacttataatatactggcactactgcatgtactagagggcttgaatcagcttgcacct
cgcctgagagctcagatagtttccgacagttttgctgagggtaaagttttgaatttggat
gacttgagtacaactggtgctagagtttttcatgaggaatttattaacagcaaactcact
cccaaattagcccggcaaattcaagatgcccttgccttgtgcagtgggagtcttccttct
tggtgttaccagttgacaaaagcatgtccatttttgtttccttttgagactcggagacag
tatttctattcaacagcttttggattgtctcgcgctctgtaccgtcttcagcagcagcag
ggtgctgatggtcatggtgcaaatgaacgagaggtgagagttgggagattgcaacggcag
aaagtccgcgtttcccgaaaccggattttggattctgctgcaaaagtaatggagatgtat
tccagccaaaaatctgtgcttgaagtagaatattttggtgaagtgggcactggcttgggt
cctacgcttgagttctacacacttttaagtcatgacctacaaagagttagacttggcatg
tggaggtcaaattcttcaatggagaaaacatcaatggatgttgatggagatgaacataaa
gatggcaaaagcaatggtgacattgtccaagctccgcttgggttgttccctcgtccctgg
cctccaaacgctgttgcttctgatggtagccagttttcaaaagtgatggaatactttagg
ttggttgggcgtgtgatggcgaaggctcttcaagatgggcggctattggacttgccacta
tcaacagcattttataagcttttgcttggtcaagagcttgatttacatgatatcctttcc
tttgatgccgagcttggaaagactctgcaagaattacgtaatcttgtctgccggaaacta
tatttagaatcaaatggtgataatcgtgatgccattgttgaattgcgtttacgtggagtg
tcaattgatgatctgtgtttagattttacactccctggctatccagattatgtgttgaaa
cctggagatgaaaatgttgacatcaataacttggaggagtacatatctttagttgttgac
gcaacagtgaagactgggataatgaggcaaattgaagcatttagagcagggtttaatcag
gtctttgacatatcatctttacaaatatttactccacatgagttggactatctgctttgt
ggtcgtagagagttgtgggaggcggagacccttgctgatcatataaagtttgatcatgga
tacaatgccaagagccctgcaatacttaatttgcttgagattatgggtgagttcacgcca
gagcagcagcgtgccttctgccagtttgttactggtgcacctcggcttccacctggtggt
ttggcggtgctgaatccaaaactgacgattgtgagaaagcattcttcgactgcaaataat
gcggcaaccaacgggaccggggtttcagagttggcagatgatgacctgcccagtgtcatg
acatgcgctaattacctgaagcttcctccttattcaaccaaggaaattatgttcaagaaa
ttattgtatgcaatcagtgaagggcaaggatcctttgatttgtcatga
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integrated database retrieval system
