Pyrus x bretschneideri (Chinese white pear): 103965700
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Entry
103965700 CDS
T03446
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103965700
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103965700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103965700
NCBI-ProteinID:
XP_009377049
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MIPRTCIVLLSLLTSFSPLATAFLNLTLPGQHPNPDEVVLQVNRKVNASLARRQMLQTTQ
KDQLDSTCLTGNPIDDCWKCDPDWPNNRQSLADCAIGFGQYAHGGKGGEYYIVTDDSDDD
AVTPKPGTLRYAVIQTEPLWIVFPRNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITL
QYISNVIIHNVHIHHCYQSGQANVRSSPTHYGFRTESDGDGISIFGSKDIWIDHCSLSHC
KDGLIDAVMGSTGITISNNYFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEELVQRMP
RCRRGYIHVVNNDFTQWEMYAIGGSGDPTINSQGNRYTAPSNPNAKEVTKRVETAEGKWK
NWNWRSEGDIMVNGAFFVASGEGVELNYEKAYSVEPKSAALIDQLIMHAGALGVGGRDNN
LGKWSSNGDGNGLGSGPDYTDDMSGSSRIPLPPLSSTSTIFSFFISLSCLLFLYIIPEMH
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatccccagaacctgcattgtcctgctttctcttctcacctcattttcccctctcgcc
actgcattcctcaacctcactctccctggtcagcatcccaacccagatgaagttgttcta
caagttaataggaaggttaatgcttcgttagcaagaaggcaaatgctgcaaacaacccag
aaagaccagctggattctacgtgcctgaccggaaacccgatagatgactgctggaaatgt
gatccagattggccaaataacaggcaaagcctggcagattgtgcaatagggtttggtcaa
tatgctcatggaggcaaaggtggtgagtattacattgtgacggacgactcagatgacgac
gcggtaactccgaagccaggcactctcagatatgctgtgattcagactgagcctctctgg
attgtgttccctcgcaacatgctcatcaagctctcccaagaacttatcttcaacagttac
aaaaccctcgatggccgcggagcgaatgtccacattgttggtggtggatgcatcactctg
cagtacataagcaatgtcatcatccacaatgtgcatatccaccattgttatcagtcaggt
caggctaatgtgcgttccagcccaactcactacggctttcgcacagaatcagacggcgat
gggatctccatctttggatccaaagacatatggatagaccattgtagcctatcacactgc
aaggatggactgatagatgcagtgatggggtccacaggaataacaatatcaaacaattat
ttctctcatcacaacgaagtcatgctgctgggccacagcgatgactacttgcccgactct
ggaatgcaagtcaccatagccttcaatcactttggagaagagttggtgcagagaatgcct
aggtgtagaaggggctacatccacgtggtcaacaacgacttcacccaatgggaaatgtac
gccatcggaggcagtggagaccctacaattaacagccagggcaaccgctacactgctccg
tcaaaccctaacgccaaggaggtgacaaagcgtgtggagacggcggaagggaagtggaag
aactggaactggagatcggagggggacataatggtaaatggagcattttttgtagcatct
ggggagggagtggagcttaactatgagaaggcctacagtgtggagcccaagtctgctgcg
cttattgaccaactcatcatgcatgctggtgcccttggtgttggtggcagggacaacaac
ctggggaagtggagctcgaacggcgacggaaatggtttaggttcaggtccagactatacg
gatgacatgtcgggaagcagccgtattccactgccgccactttcatccacctccaccatc
ttctcatttttcatctcattgtcatgcttgctatttttgtatattatcccagagatgcat
ttatga
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