Pyrus x bretschneideri (Chinese white pear): 103966047
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Entry
103966047 CDS
T03446
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103966047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103966047
03110 Chaperones and folding catalysts [BR:
pxb03110
]
103966047
03029 Mitochondrial biogenesis [BR:
pxb03029
]
103966047
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pxb04147
]
103966047
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103966047
Messenger RNA biogenesis [BR:
pxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103966047
Chaperones and folding catalysts [BR:
pxb03110
]
Heat shock proteins
HSP60 / Chaperonin
103966047
Mitochondrial biogenesis [BR:
pxb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103966047
Exosome [BR:
pxb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103966047
Exosomal proteins of other body fluids (saliva and urine)
103966047
Exosomal proteins of breast cancer cells
103966047
Exosomal proteins of colorectal cancer cells
103966047
Exosomal proteins of bladder cancer cells
103966047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8844
Motif
Other DBs
NCBI-GeneID:
103966047
NCBI-ProteinID:
XP_009377449
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MYRFASSLASKARVARNCTKQIGGRLSWSRNYAAKDIKFGVEARALMLSGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TLATILTKAIYTEGCKSVAAGMNAMDLRRGITSAIDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISNINAVVKVLELAVKKQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKAGLQDLAVLTGGSVITEELGLNLDKVELDMLGSCKKITVSKDD
TVILDGAGDKKAIDERSEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLRTVNFDQKVGVQIIQNALKA
PVHTIASNAGVEGAVVVGKLLEHDNADLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPSEKETPAMGGGMGGGMGGMDY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcttcaagcctggcttccaaagctcgggttgccaggaactgtaccaag
cagattggtggtaggctgagttggagcagaaactatgcagccaaagacattaaattcggg
gtggaggcccgagccctcatgctcagtggtgtcgaagagcttgcggatgctgtcaaagtc
accatgggacctaaggggcgtaatgtggttattgaacaaagctttggggcacccaaagtg
acaaaagatggtgtaacagttgcaaaaagtatagagttcaaggataaagtcaagaatgtt
ggtgctagcctagtgaaacaggttgctaatgctaccaatgatgtagcgggtgatggtaca
acacttgctacaatcttgaccaaggctatttatactgaaggatgcaagtcagttgctgct
gggatgaacgcaatggacctgcgacgtggtattacttcggcaattgattctgtggtaaca
aacttgaagagcagagcacgaatgatcagcacttctgaagagatagcacaggttggaaca
atatcagcgaatggagagagagaaattggtgagttgattgcaaaggccatggagaaggtt
ggaaaagagggagtaatcacaatctctgatgggaaaacattgtacaatgagttggaagtt
gtcgaggggatgaagctggacagaggctacatatccccttatttcatcaccaaccagaaa
aatcagaaatgtgaattggaagatcctctaattctaatccatgagaagaaaatctcaaat
attaatgccgtggtcaaagtattggagttggctgtgaagaagcaaaggcctttgctgatt
gtcgcagaagatgtagagagcgatgcgctggcaactcttattctaaataagcttcgtgct
ggtatcaaggtctgtgcaatcaaagcccctggttttggtgaaaataggaaagccggtctc
caggatcttgccgttctcactgggggttctgttattactgaagagcttggtctgaatctt
gacaaagtggaattggatatgctcggaagttgcaaaaagatcacagtttcaaaagatgac
actgtaattcttgatggtgctggtgacaagaaggccattgacgaaagatctgaacagatt
aggtcggcaattgaattaagcacttctgactatgacaaggaaaagttacaggagagactc
gcaaagctttctggtggtgttgccgttttgaagattggaggagctagtgaagcggaagtt
agtgagaagaaggatagggttaccgatgccttaaatgccactaaggctgccgttgaagag
ggtatagtaccaggtggtggtgttgctcttctttatgcatctaaagagttggaaaagctc
cgaactgttaattttgatcagaaggttggagttcagattattcagaatgctctaaaggca
cctgttcatacaattgcttctaacgcgggagttgagggagctgttgttgttggtaagcta
ttggagcatgataacgctgatcttggctatgatgcagccaaaggtgaatatgttgatatg
attaaagctggaataattgatccattgaaagtaattagaactgctttagtggatgctgca
agtgtgtcgtctttgctcacgactactgaagctgttgtagttgagcttcccagtgaaaag
gagaccccggcaatgggtggcggtatgggtggtggcatgggtggaatggattactga
DBGET
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