Pyrus x bretschneideri (Chinese white pear): 103966210
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Entry
103966210 CDS
T03446
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103966210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103966210
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103966210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
PD40
Beta-prop_TEP1_2nd
DUF7397
DPPIV_N
Beta-prop_WDR90_POC16_2nd
WDR55
KTSC
Motif
Other DBs
NCBI-GeneID:
103966210
NCBI-ProteinID:
XP_009377640
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MPSFPHPGSVTICEINRDLITAESLSDDVAKDTYGKILGMVFSPLPFQSDQLVQPPSPDY
DAEQVVTASPTKGFLKNLQGIINLTPLFRPNHVNLLPEVDLQGVSWHQHKHVVALISGPN
QVIIRDFEDLEGKEPCILANESQREVKVLEWRPNGGRQLAVACKGGICIWAASFPGSAAS
IRSGSSSFLGTLSRGSGIRYTLVDFLRTHNEEQISALSWSPDGRYLASGSYESSSFTIWD
VSQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGA
SWDPDGRMILLAFSKSSTMGSIHFASKPPSLDAHLLPVELPEMMSLTNSQGIEKIAWDAS
GERLAISFKDGGDLYWGLIAIYDVRRTPLISASLIGFIRGPGDNPKPVAFSFHDKFKQGP
LLFVCWSSGLCCTYPLIFRSHVLP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctttcctcatcccggttctgtcaccatttgtgaaatcaatcgcgacctcatc
actgctgagagcctctcggacgatgtagccaaggacacttatggaaagattcttggaatg
gtattcagcccacttccgtttcaatcggatcagctggtgcagcccccgagtcccgactat
gatgccgagcaggttgtaaccgcatctccaacaaagggatttctaaaaaatttgcagggg
attattaacctcactcctctcttccgccctaatcatgtaaatttattaccagaagttgat
cttcaaggtgtgagctggcaccaacataaacatgtcgtagcgcttatatctggccccaat
caagttataattcgtgatttcgaggatttagaagggaaggagccatgcattttggccaat
gaatcccagagagaggtcaaagtacttgagtggaggccaaacggtgggagacaacttgct
gtagcatgcaaaggtggaatttgcatttgggctgcttctttcccgggaagtgcagcatct
atcagatctgggtcttcttccttcctgggcactctctccagaggttctggaattcgatat
actttggtggattttcttcgaactcataacgaggaacagattagtgcgttgtcatggagt
cctgatggaagatatttggcatctggttcttatgagagctcatcatttaccatatgggat
gtttctcaagggcttgggacacctattagacgaggactgggtggcatttcaatgctgaag
tggtcgccaactggggattactttttttcggcaaaatttgatggaacattttatctttgg
gagacaaacacatggacatctgaaccatggtcttcaactagtggcttcgtcaagggagca
tcatgggatcctgatggtcgtatgatacttctcgctttctctaaatcttcaaccatgggt
tcaattcactttgcttcaaagcctccatcacttgatgcgcacttattacctgttgaacta
ccagagatgatgtccttaacaaatagtcaaggcattgagaagatagcttgggatgcttca
ggagagcgactggctatatcttttaaagatggcggtgacttatactggggtcttattgcc
atttacgatgttaggaggacccctctaatatctgcatcattgattgggtttattagaggt
cccggagacaatccaaaaccagtggcattttcatttcatgacaagtttaaacagggaccc
ttgctttttgtgtgttggagtagtggattatgctgtacctaccctctcatatttcgttcc
catgttcttccctag
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