Pyrus x bretschneideri (Chinese white pear): 103966511
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Entry
103966511 CDS
T03446
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103966511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103966511
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103966511
mRNA degradation factors
5'-3' decay
Decapping complex
103966511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
103966511
NCBI-ProteinID:
XP_009377953
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MVGDGGVGRSVNMERSNGTDFRDLLERSSSENKLFDASQYEFFGQNLVDEVELGGLDDVE
DRKPLFGPVDNEYHLFEKEEGLGLGSLSDVDDLASTFAKLNKVVTGPRHPGVIGDRGSGS
FSRESSSATDWAQDGDFNNWLDQHMFDTEISQEGKRWSSQPQPSSARFSESKQQKPLYRT
SSYPDQQPVQHHFSSEPIVPPKSAFTSFPPPGNKFPQGSPHQLNLSALAGGSQLPFSAPN
LSPLSNSNLHMAGLPLGLHYGGNMPQFANPGLPFNSRSQNHWVTHAGVLHGDHSSLINNI
LQQQLPHQNGLISPQLLSAQQQQLQQQRLHHSVQPSMAHFAAMQSQFYGTHPSSSHKSMH
GLSDVRDHRPKRGKQRFSQGSDAGSQKSESGWIQFRSKHMTSEEIESILKMQHAATHSND
PYIDDYYHQASLSKKAAGLRLKHPFCPSHLRESPSRGRNSTDQHTHSSVDALGRIPLASI
RRPRPLLEVDPPPGSGDGKQVSEKPLEQEPMLAARIAIEDGLCLLLDIDDIDRLLQHGQP
QDGGVQLRRRRQILLEGLAASLQLVDPLGKGSHSAGLAPKDDLVFLRIVSLPKGRKLLSR
FIQLLFPGSELARIVCMTVFRHLRFLYGGLPSDPGAAETTTNLAKTVSTCINGVDLRALS
ACLVAVVCSSEQPPLRPLGSPAGDGATIILKSVLERATVLLSDPHAAGSCSISNRTLWQA
SFDEFFGLLTKYCLSKYETIVQSIFTQSQQSAEVIGSEATRAIHREMPVELLRASLPHTD
EHQRKLLSDFAHRSMPISGLNAHGGSGGQMNSESVRG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtcggggacggcggtgttggtcgttctgtaaatatggagagatctaatggcacggat
ttcagggacttgcttgagcgttcctcgtcagagaataaactctttgatgcgtcacaatat
gaattttttggtcaaaatctggtggacgaagttgagttggggggtttggacgatgtggaa
gacaggaaacctttattcgggcctgttgataatgagtaccatttatttgagaaagaagag
ggtcttggtttgggatctttatctgacgtcgatgatctggcaagtacttttgcaaagtta
aacaaagttgtaacaggaccaagacatccaggagttattggcgacagaggttcaggatct
ttttcacgggaaagttcatcagccactgattgggcccaagacggagatttcaataactgg
ttagatcagcatatgtttgatacagaaatttcacaggaaggaaagaggtggtcttcacag
ccccaaccttcttctgctcgattttcagaatcaaaacagcaaaagcctttgtacagaaca
tcttcatacccagaccagcagccagtccagcatcacttctctagtgaaccaattgtaccg
cccaagtcagcattcacatcattccctcctcctggaaacaagttcccacagggttcacca
catcagctgaatctttctgctcttgccggtggttcccagttgcctttttctgcaccaaac
ctttctcctttatctaactctaatcttcatatggccggtttacctcttgggttgcattat
ggagggaacatgcctcagtttgccaaccctggccttcctttcaatagcaggtcacaaaat
cattgggttacgcatgctggagtattgcacggtgatcattccagcctcataaacaatata
ttgcagcaacagctccctcatcaaaatggacttatttccccacaattactgtcagctcag
cagcagcagctacaacagcagagattgcaccactcggttcagccatctatggcccatttt
gctgcaatgcagtctcagttttatggtactcatccttcttcatcacataagtcaatgcat
gggttgtccgacgtacgagatcatagaccgaaaagaggaaaacaacgtttttctcaaggc
tctgatgctggtagtcagaaaagtgagagtgggtggatccagttcaggtctaagcacatg
acatctgaagagatagagagtattcttaaaatgcagcatgcagcaacacatagcaatgac
ccctatattgatgattactaccaccaggcaagcctttccaaaaaagcagctggcttgcgg
ttgaaacatcctttttgcccatctcatcttagagagtccccctcccgaggtcgtaatagt
actgatcagcatactcatagttctgttgacgctcttgggagaattcccctcgcttccata
cgtaggcctcgccccctccttgaagttgatcctccccctggttctggcgacggcaaacag
gtctctgagaagcctctggagcaggaacccatgcttgctgctagaattgctattgaggat
ggcctttgtctccttcttgatattgatgacattgatcgactgctacaacatggtcagccc
caagatggtggggttcaactcaggcgaaggcggcaaatactgctagaagggttggcggca
tcgcttcagcttgttgacccacttggtaaaggcagccactcagcggggctggctccaaag
gatgaccttgtgttcctacgtatagtttctcttcctaaggggcgcaagctcctttctagg
tttattcagcttctcttccctggtagtgagcttgcccgtattgtctgtatgacagttttc
cgtcatttaaggtttttgtatggtggtctaccctctgatcctggagctgctgagacaact
actaatcttgcaaagacagtatctacatgtataaatggtgtggatcttcgtgcattaagt
gcttgtcttgttgcagtagtttgttcatcagagcagccaccacttcgaccccttggaagc
cctgctggagatggggccactattattctaaaatctgttcttgaaagggcaactgtactc
ttaagtgaccctcatgctgctggaagctgtagcatttctaaccgcaccctttggcaggca
tcctttgatgaattttttggtctgctcaccaagtattgcctgagtaagtatgaaactata
gtacaatcaatatttacacagagtcagcagagtgcagaagttattggttcagaggccacc
agggcgatacatcgtgaaatgcctgtggagcttctgcgtgctagtcttcctcacacagat
gagcatcagcggaagcttttgtcagattttgctcatcgatcaatgcccatttctggtctt
aatgcccatggcgggagcggaggtcaaatgaactctgaatcagtgaggggataa
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