Pyrus x bretschneideri (Chinese white pear): 103967160
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Entry
103967160 CDS
T03446
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103967160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxb03032
]
103967160
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103967160
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103967160
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103967160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
103967160
NCBI-ProteinID:
XP_009378696
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MTEGSSPAKTFIGVRFLLLGFDPFDEHQVRSKLVDCGGEDVAHYSPNCTHVIVDKIVYDD
PVCVAARNDAKTLVTALWVHHSFDVGLPIDPTSIIYRPLRDLNGIPDAKRLIVCLTGYQR
QDRDDIMTMVGLMGARFSKPLVANKVTHLVCYKFEGEKYELAKKIPKMKLVNHRWLEDCL
RDWQLLPEDNYNISGYELEMMEAEARDSEDEAENTFGKQSGVRSMYKSPHNIKAGSPATS
RLPKSEGEVPKVPLIFDNAIGNLSIPQNENKLDQTSSFSNSYVSKGLSCQDACELRDASG
CDLNDQHHRTPDPKVRDDFISNCGSAGRASHSAGKISYSRQTLWMATVPLYTGDKSSGGS
VSSKVPICKSSATLKDQANDKFDPNCVEVPLKGIHLQNGEESSGILPRKRVMDLSYASSK
SQKTSPGAKLGSMHSPSPSNKSPKVKPTSLIDGSCRTTSHYIVTNDDHSLDKTGNLNAAG
NSTAGVSPAKLSNLIQKPLACDLPFSATVISNMGKDENANMKSPLTTLRRLRKSSLSNKP
GIVDCAEEKSTAAVSKAVELQNQPQDVEGSSASNKKSVNNSSNDPANLNMLKEGNNDLVT
KHLKQKVKSKKTLGSRPRLVSANQKGSVHLYKDASLNDTAVLYNAGDHQKSPDPTKLDVL
CPDINVEAPYEVDGNDVDMSADVAEKNIESVDDETQAPEEESEHKLENVVHEAKGIVVQA
TSKCVEKSEQEQHLQDHSDACTPRDAMASLGTEGNEREKSVSNNISLLVEPAADGDAVEG
KKNQGKKHALGKTKLKTVHPVTDVMKPEKVASEENTRNDNTRVTEKEKEKRLAGLVGKSK
CRGAPQNKLENSAKMKENKPIVGGDQTVSKAEQQAEKSTAKSGITPLKIIQTSAERSDNP
SIPEGKASSKVKIEPVRFILSGHRFQRKEFQKVIKRLKGRCCRDSHHWSYQATHFISPDR
VGRTEKFFAAAASGRWILKSDYLEASDKEGRFLEEEPFEWYKNGLSEDGTINLEAPRKWR
LLRERTGHGAFHGMRVIIYGECIAPPLDTLKRVMKAGDGTILATSPPYTRFLKSGVDYAI
VSPGMPRADMWVQELLKHEIPCVAADYLVEYVCKPGYPLDRHVLYNTNAWAEKSFERVQS
RAEEVVEGAFTGGDGDDASCGGGSDIPCVVCGSGERGEVMLICGNESGSVGCGIGTHIEC
CNPPLESVPEDDWFCPNCSWSKNSTKSSKKRKKDRSSK
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggaagttcaccggccaagacgtttataggcgtccgtttccttcttttggga
ttcgatccctttgacgagcaccaggttcgatctaagcttgtagattgcggcggagaggat
gttgcccactattcccccaattgcacccacgtcattgtggataaaattgtgtatgatgat
cccgtatgtgttgctgctcgaaatgacgccaagactcttgtcaccgctttatgggttcat
catagttttgatgtcggactccccattgatcccacttcgattatatacagacctcttaga
gatttgaatggtattccggatgccaagagactaattgtatgcttgactggatatcaacga
caagatagagatgacattatgacaatggttgggttaatgggtgctcggttttctaagccc
ttggtggcaaacaaagtcactcatctcgtatgctacaaatttgagggggagaagtacgaa
cttgccaagaaaatcccaaagatgaagcttgtcaaccatcgttggttggaagattgctta
agggattggcaacttcttccagaagataattacaacattagtggctatgaactggagatg
atggaggctgaggctagagattcagaagatgaggctgaaaacacatttgggaagcaatct
ggggtgagaagcatgtataaaagtcctcacaatataaaagctggctcaccagcaacgtct
agattgcctaaatcagaaggagaggtgcctaaggttcccttgatttttgataatgccatt
ggcaacttatcaattcctcagaatgagaataaattggatcaaacctcaagcttttctaat
tcttatgtttccaagggattaagctgtcaggatgcatgcgagttgagggatgctagtggc
tgtgacctaaatgatcaacatcaccgaacccctgaccctaaggtgagagatgatttcata
tctaattgtggttctgctggaagggcttcgcactctgcagggaaaataagctactcaagg
caaaccttatggatggcaacagttccactatacacgggtgataaatcaagtggtggtagt
gtgtcttctaaagtacctatttgcaaatcaagtgccactttgaaagatcaagcaaatgac
aaatttgaccccaattgtgttgaagtccctttaaaaggaattcatttacagaatggagaa
gagtcaagtggtatattgcctcggaaaagggtgatggatctctcttatgctagctccaaa
tcacagaagacgagtccaggtgcaaaattaggcagtatgcatagtccttcaccaagtaat
aaatctccaaaagtaaagcctacatctttgattgatggttcatgcaggactactagccat
tatattgtcacaaatgatgaccactctctggataagactggcaatttgaatgctgcagga
aactcaacggctggtgtttcaccagccaaattatctaatttaattcagaagccattggca
tgtgatctccccttctctgccactgtgatctcaaacatggggaaagatgaaaatgcaaac
atgaaatcacctctaaccactcttcgaagattaagaaagtctagcttatccaacaagcct
ggtattgtagattgtgctgaggaaaagtctacagctgcagtcagcaaagcagtggaactg
caaaatcagccacaagatgttgaaggttcatctgcaagtaacaaaaagtcagtgaataac
agttccaacgaccctgctaatctgaacatgcttaaagagggaaataatgacttggtaaca
aaacatcttaagcagaaggtgaagtccaagaagactctgggttctaggcctaggttagtt
tcagctaaccaaaaggggtctgtgcacttatataaagatgcctccttaaatgatacggca
gttctttataatgcaggggatcatcagaaatcccctgatcccacaaagcttgatgtgctt
tgtccagatattaatgttgaggccccatacgaggtggatggaaacgatgttgacatgtct
gcagatgttgctgagaaaaacattgaatctgtggatgatgaaactcaggctccagaggaa
gaaagtgaacataaattagagaatgtagttcacgaagctaagggtatagtggtccaagca
acaagtaaatgtgttgagaagtcagaacaggagcagcacctacaggatcattctgatgcc
tgtactccccgtgatgcaatggcctcattgggtacagaaggaaacgaacgagaaaagtca
gtttctaacaacatttctctgctggttgagccagccgcagacggagacgctgtcgaggga
aagaagaaccaagggaaaaagcatgctttgggtaaaaccaagctgaaaactgttcatcct
gttacggatgttatgaaacctgaaaaagtagcatctgaggaaaatactcggaatgataac
actagggtgacagagaaggaaaaagaaaaaagacttgcaggtctagtgggcaaatctaag
tgccgcggtgcgccccaaaataagttagagaactctgccaaaatgaaggagaacaagcca
attgttggtggagatcaaactgtaagcaaggccgaacagcaggcagaaaaatcaacagct
aaatctggtataactccgttgaagataattcaaacatctgcggagagaagtgacaatcct
tcaatacccgaagggaaggcttcaagcaaagttaaaattgaacctgttaggttcattctg
agtgggcaccgatttcaaagaaaggagtttcaaaaagttatcaagcgtttgaaaggaagg
tgttgccgggattctcatcactggtcttaccaggcaacgcacttcatctctccagatcga
gttggcaggacagagaaatttttcgcagctgcagcgtctggaaggtggattcttaagagt
gattatctggaagctagtgataaggaaggaaggtttttggaagaagaaccttttgaatgg
tacaagaatggtcttagcgaagatggtacaatcaatttggaggccccaaggaagtggcgg
ctcttgagagagagaacaggccatggtgctttccatggaatgcgcgttatcatatatggc
gaatgtattgcaccacctttggatactctgaagcgtgtcatgaaggctggtgacggaaca
atattggcgacttctcctccttatacccgcttccttaagtcgggggttgactatgccatt
gtcagcccaggcatgccgcgtgccgatatgtgggtacaagagttgttgaagcatgagata
ccctgcgtagcggccgattacttggttgagtacgtgtgcaaacctgggtacccgctcgac
agacacgtgttatacaacaccaatgcgtgggcggaaaagtcttttgagagagtgcagagt
agagcggaagaggtggtggagggagcgtttacaggtggggatggtgatgatgctagttgt
ggtggtggtagcgacataccttgcgtggtgtgtgggtctggggagagaggggaggtgatg
ctgatatgtggcaacgaaagtgggagcgttgggtgtggaattggtactcatatcgagtgc
tgcaatccaccgcttgaaagtgttccggaggatgactggttttgtccaaactgtagttgg
agcaaaaacagcaccaagtcgtccaagaaaaggaaaaaggataggagcagcaaatga
DBGET
integrated database retrieval system
