KEGG   Pyrus x bretschneideri (Chinese white pear): 103967173
Entry
103967173         CDS       T03446                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1 isoform X1
  KO
K11797  PH-interacting protein
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pxb04121]
    103967173
Ubiquitin system [BR:pxb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103967173
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP WDR55 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Bromodomain Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 WDR90_beta-prop_4th VPS8_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 103967173
NCBI-ProteinID: XP_009378712
LinkDB
Position
Unknown
AA seq 1663 aa
MDPRKCTLSGGATSLAMAPPSILNRLNEKAQFEKEERDAGHVVEAGVDIDIREVYFLIMH
FLSLGPCQRTFEQFGNDLLEHQLLPRRFHAWFSRSRIGSDNSNEDATSFPLSYNNLVERY
PHIERDHLVKLLRQLLLSIPTPLHGKVGRSTLNAADVPTLLGTGSFSLLDSDRNKENKRV
KPLPAHLRWPYMQADQIHGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQKMNNKKK
LRGHRNAVYCAIFDRSGRYVITGADDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA
LVASASNDFSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRLSAVYQLLSSSDDGTCRIWD
ARSSQCPLRIYMPKPSETSTGKGNAFAITGSSSSNGPQSHQILCCAYNANGTVFVTGSSD
TFARVWNALKSNTDNSEQPIHEMDVLAGHENDVNYVQFSGCVIPSKSSFSDSVKEETNGK
FKNSWFCHNNIVTCSRDGSAIIWVPRSHKFHGKVGRWTRAYHLKVPPPPLPPQPPRGGPR
QRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPF
NPRIAMSAGYDGQTIVWDIWEGVPIKIYELGHVKLVDGKFSADGTSIVLSDDVGQIYLIN
TGEGESQKDAEYDQFFLGDYRPLARDEFGYLIDQETQLSTYRRNLQDPLCDSSMIPYPEP
YQSTYQQRRLGALGMEWRPSSMKFSVGVDINTGQEYMMPPLPDLERMIEPLPDFIDAMLW
EPENEVVSEDTDSEYNVTDENSSEGEKGNISTSSSSDPDCSEEDSEAGCSHKDGLRRSRR
KRPRVESSERRVKKRRVGERDRVISGIKRTKNSKGGQKVSKRKSSKAKTLRPQRVAARNA
RTVFSQNPGTSTEGEEDDWEDDSSNSESLQQDFHAQSDDGDFQIMQQKRTKEEPSRHEFG
NIAKPRVVCSSQSNVRSMPKLVFKIKKQEAPKDVKLKDNNQADLVSPSSRYQDVTPDNRI
TNSSVDPDSSSVDVVDLKFSRNLLANDLTDTGETVKTDNSLEASASYQDSRVMEAATGSL
ASFNVHIEEMNNVHRYVNPESNCEQFCNHSKMKGKENYEGVLPCRDEEHTGTRAFEDLDG
LKSRELSHTDEALVSSSFDSSALGEHKQKIIVCSPEIEDFARRKHSGDYASPKFPAQNFT
SSRDSIPNDSSSMDLIPNSNFGVRKVGGGAGRSTSLKFVCKHRTNSEGSGGNVEDYATNI
NDHHDSGMDLPAAATNAIRGTRTFKIKTTSQKVDSVSCSPKLRWGHQTLGTSKDAEDSSA
KLCDQIHQRPRSTRSRQGSCNDYDQSSSTRSMLVNPAGKLPWLMLSKHEDGYRYIPQLGD
EVVYLRQGHQEYLKLVKNSEEGPWGPWESIKENIEVAEICKVESLDYASLPGSGESCCKI
KLRFVDPSSAILSKALKLTLPEIDFNDFIVEKTWYNASIRRNWTTGEECAVWWRDSISDE
GGTWWVGRIVRCQAKSHEFPDSPWLRYEVRYENDDETHLHCPWELREPSIVDDPSSCEQP
HIDSESKEKLLRIFSKLQQKDLQTIQQLNQAVQKADFCNSFPVQLYPELIQSRLENDYYR
SLEAVKHDIMVMMSNAQHYFKRNELQARIKHISKRFKKKLSKL
NT seq 4992 nt   +upstreamnt  +downstreamnt
atggatcctcggaagtgtactttgtctggtggtgcaacttctcttgctatggcacctcca
agcattttgaataggttaaatgagaaggctcagtttgagaaagaagagagggatgcaggt
catgttgtcgaggctggagtcgatatagacattagagaggtttattttttgattatgcat
tttctgtctcttgggccatgccagaggactttcgaacagtttgggaatgatcttctggaa
catcagcttctacctagaaggtttcatgcttggttttcaaggagcagaataggaagtgac
aatagtaatgaggatgctacctctttcccattgagttacaacaacttggttgaaaggtat
cctcatatagagagagatcacttggtaaagcttctaaggcaactgctactgagtataccc
actcctttacatggcaaggttggaagaagtactctgaatgcagctgatgtccctacatta
ctgggaactggttccttctcgcttctggatagtgataggaataaggaaaataagagagtt
aagcccctgccagctcacctgcgttggccttacatgcaggctgatcaaattcatgggctt
agtttaagggaaattggaggaggtttcacaaagcatcatcgagctccatccattcgctct
gcgtgttatgcgattgctaaaccatcaactatggtgcagaagatgaacaacaaaaagaag
ctacgggggcaccgtaatgctgtctactgtgccatttttgatcggtctgggagatatgtt
atcacgggtgcagatgatcggcttgtgaagatatggtcaatggaaactgcactttgcttg
gctagctgtcgtggacatgaaggagacattactgacttggctgtaagttcgaacaatgct
ttggtggcatctgcttcaaatgacttttccattcgagtttggcgtttgccagatggattt
ccaatttcagttcttcaggggcatactggggctgtgactgctattgcttttagtcccagg
cttagtgctgtttaccaacttctatcgtcatcagatgatgggacttgtcgaatctgggat
gctaggtcctcccaatgcccgctgcgaatatacatgccaaaaccttcagagacttcaact
gggaagggcaatgcttttgcaatcactggatcctcctcgagcaatggtccacagagccat
caaatactttgttgtgcttacaatgccaatgggactgtttttgtcactggtagctctgac
acttttgcaagggtctggaatgctttaaaatctaatacagataactcagaacaaccaata
catgagatggatgtactggcgggccacgagaatgacgtgaattatgtccaattcagtggt
tgtgtcattccttcaaagtcttcattttcggactcggtcaaggaggagactaatgggaag
ttcaaaaattcctggttttgtcacaacaacatagttacctgctctcgtgatggcagtgcc
attatatgggttccaagatcacacaaattccatgggaaagttggacgttggacacgtgca
tatcatctaaaagttccacctcccccactgcctcctcagcctcctcgaggaggcccacgt
caaagatttcttcccacccctcgtggtgttaacatgattgtgtggagcctggataaccgc
tttgtgcttgcagctatcatggattgcagaatttgtgtttggaatgctgttgatggtagc
ttagtacattctttaaccggtcacactgcatcgtcttatgttttggatgttcatcccttc
aatcctcgaattgctatgagtgctgggtatgatgggcaaacaatagtttgggatatatgg
gagggcgtgcctattaagatatacgaacttggacatgtaaagttggttgatgggaagttt
tcggcggatggtacatcaatagtactttcagatgacgttggccaaatatatttaataaac
acaggtgaaggcgagtctcaaaaagatgctgaatatgatcagttcttccttggggattat
cgcccccttgcacgggatgagtttggatatcttattgatcaggagacacaactttccact
taccgaaggaatcttcaagatcctctatgtgattcaagtatgataccataccccgaacct
tatcagagtacataccagcaacgaagacttggtgctctgggcatggaatggcgtccgtca
tccatgaaattttctgttggtgtggatatcaatacaggccaagaatatatgatgcctcct
ttgccagatttagaaagaatgattgaaccactaccagattttattgatgccatgttatgg
gaaccagaaaatgaggttgtaagtgaagatactgattcagagtataatgttactgatgaa
aattccagtgaaggggagaaaggaaatattagcaccagttcttctagtgatccagactgc
agcgaagaagacagtgaagctggatgcagtcacaaggatggtcttcgtcgatcaaggaga
aaaagaccaagggttgagtcttctgagaggcgtgttaagaaaaggagagtgggtgagcgt
gatcgcgttatatctgggattaaaagaactaaaaattcaaaaggtggccagaaagtttca
aagaggaagtcttctaaagcaaagacattgagaccccagcgagtagcagcacgcaatgct
cgaactgtgttttctcagaaccctggtacatctacagaaggagaagaagatgattgggaa
gatgattcatcgaatagtgagtctcttcagcaagatttccacgctcaaagcgatgatgga
gacttccagataatgcaacaaaaacgtactaaagaagaaccatctcgacatgagtttggc
aatatagcgaagccacgtgtagtttgttcgtctcagtcaaatgtcagaagcatgccgaaa
ttggtttttaagattaagaagcaagaggctccaaaggatgtaaaactcaaagataataat
caggctgatttggtgtctccatcttctagatatcaagatgtcactccagataacaggatt
actaacagctctgtggatccagattcctcttcggtggatgtggttgacctaaagttttca
agaaatctcttagccaatgatttgacagatactggggaaaccgtaaagacagataattct
ttggaagcatccgcaagttaccaggatagcagagtcatggaagcagctactgggtcgctt
gctagttttaatgtccatatagaagagatgaataatgtccatcggtatgttaatcctgag
agtaattgtgaacaattttgtaatcattcaaaaatgaagggaaaggaaaattatgaaggt
gtcttgccttgcagggatgaggaacatactggaacacgtgcatttgaggatctggatggt
ctcaaaagtagagagctttctcatactgacgaggcccttgtatcttcatcatttgattcc
tcagctttgggcgagcacaaacaaaagataattgtgtgttctccggagatagaggacttt
gctagaagaaagcactctggtgattatgcttctcctaaatttcctgcacaaaacttcaca
agttctagagattcaatccccaacgattcttcaagcatggatctgattccaaattcaaat
tttggggtacggaaggtgggtggaggtgctggcagatcaacttctttgaagtttgtttgc
aagcacaggactaattcagaaggttctggtggtaatgtcgaagattatgcaacaaatatc
aacgaccatcatgattcaggaatggatctccccgcagctgcaaccaatgcaatacgtgga
acaagaacctttaagatcaaaacaacttcacagaaggtggactctgtgagctgtagccct
aagttgaggtggggccatcaaacattggggacatcaaaggatgcagaagactcctctgcc
aaattgtgtgaccagattcatcaaagaccaaggtctacgagaagtcgtcagggttcatgt
aatgactatgaccaaagttcttcaacccgaagcatgttagttaaccccgctggaaagttg
ccatggttgatgttgtcaaaacatgaggatggttaccgttatattcctcagctaggtgat
gaagttgtatacctgagacagggccatcaagagtatctaaaactagtcaagaattcagag
gagggtccttggggtccttgggaatcaattaaggaaaacatcgaagttgcggaaatttgc
aaggttgaaagcctcgattatgcttcgctgcctggttcgggggagagttgctgtaaaatc
aaacttagatttgtagacccttcttctgctatcctcagtaaagcattgaagttgactttg
cctgaaattgattttaatgatttcattgttgagaaaacgtggtataatgcttctattaga
agaaactggaccactggggaggaatgcgcagtttggtggagggattcaatttcagatgaa
ggtgggacttggtgggtaggtcgaattgttcggtgccaggccaagtcacatgagtttccc
gatagcccttggttaagatatgaggttcggtatgagaatgatgatgaaacccatttgcat
tgtccttgggaattgcgtgaaccgtccatagtagatgatccatcctcatgcgaacagccc
catattgattctgaaagcaaagagaagcttctgcgtattttttctaaattacaacagaag
gacttgcaaacaatccaacaattgaatcaagctgttcagaaggcggatttctgcaacagc
tttcctgtgcaattgtaccctgaactaatccagtcgaggttagagaacgactattataga
agcttggaagctgtgaagcatgatataatggttatgatgtcaaatgcccagcattacttc
aagagaaatgaattgcaagcccggattaagcacatctcgaaaaggtttaagaagaaactg
tcgaagttgtag

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