Pyrus x bretschneideri (Chinese white pear): 103967506
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Entry
103967506 CDS
T03446
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03030
DNA replication
pxb03410
Base excision repair
pxb03420
Nucleotide excision repair
pxb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103967506
03410 Base excision repair
103967506
03420 Nucleotide excision repair
103967506
03430 Mismatch repair
103967506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxb03032
]
103967506
03036 Chromosome and associated proteins [BR:
pxb03036
]
103967506
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103967506
DNA replication proteins [BR:
pxb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103967506
DNA Replication Termination Factors
ELG1-RFC complex
103967506
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103967506
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103967506
Check point factors
HRAD17(Rad24)-RFC complex
103967506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_30
AAA_assoc_2
AAA_24
AAA_5
AAA_14
DUF815
AAA_7
RuvB_N
ATPase_2
AAA_2
AAA_19
ResIII
bpMoxR
DNAX_ATPase_lid
TniB
nSTAND3
SLFN-g3_helicase
TK
AAA_3
Mg_chelatase
AAA_25
MCM
AAA_28
TIP49
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103967506
NCBI-ProteinID:
XP_009379030
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MAEPITLMDIDDDDNLSVQPNNKGKNVVVSVAAPSHGKATPWVEKYRPHSLADVAAHRDI
VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGINVV
RQQIQDFASTQSFSFGGESAKSSVKMVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLIC
NHVNKIIPALQSRCTRFRFAPLEEFHVSDRLKHVIEAEGLDVPASGLAAVVRLSNGDMRK
ALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKRISDMKARKGL
ALIDIVREVTMFVFKIMMPADVRVKLINDLADIEYRLTFGCNDKLQLGSLIATFTKARSA
LAAAAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccaatcactctcatggacatcgacgacgatgacaacctatctgtacaaccc
aacaacaaaggcaaaaacgtcgtcgtctccgtcgccgccccttcccacggcaaagccacg
ccgtgggtcgagaagtaccgccctcattccctcgcagacgtcgctgctcaccgcgacatt
gtcgacaccattgataggcttactagtgagaacagattgccgcacctcctactatatggc
cctcctggtactggcaaaacttcaactattcttgctgtggcacgcaagctctatggagcg
cagtaccacaatatgattctggagttgaatgcatccgatgacagggggatcaatgttgtg
cgacaacagattcaagattttgctagcacgcagagtttctcgtttgggggtgagagtgca
aagtcatctgtaaaaatggtattgctggatgaggcggacgctatgacaaaggatgctcaa
tttgctttgcgaagggtgattgagaaatacacaaagaatactaggttttcactaatttgt
aatcatgtcaacaagatcattccagcattacaatcacgatgtactcgtttccgatttgct
ccacttgaggagtttcatgtctcagatagactcaaacatgttatagaagctgaagggctt
gatgtgcctgcgagtggcttagcggcagttgtacggcttagcaatggtgacatgagaaag
gctctgaacattttgcagtcaactcatatggcttcacagcagataactgaagaagcggta
tatctttgcacaggaaatccattgcccaaagatattgagcaaatatcttactggcttttg
aacgaatcatttgctgagagtttcaaacgaatatctgacatgaaagcaagaaaagggttg
gctttgatagatattgtaagagaagtgaccatgttcgtttttaagattatgatgcccgca
gatgttcgagttaaattgattaatgatttagctgacatagagtacaggttgacgtttggg
tgcaatgataagttgcaactcggatcactgatagccactttcacaaaagctcgatctgca
cttgctgctgctgcgaagtag
DBGET
integrated database retrieval system
