Pyrus x bretschneideri (Chinese white pear): 103968111
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Entry
103968111 CDS
T03446
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103968111
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103968111
Factors involved in mRNA localization
Other mRNA localization factors
103968111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
103968111
NCBI-ProteinID:
XP_009379723
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQAEVQGPGIWVSTDSGATDSPIEYSDVSAYRLSLTEDTKA
LNQLNALIQEGKEMGSVLYTYRSCVKALPQLPDNMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAAAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDTLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWHDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPILVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPVAIMKELSIYFQKFSTQTRLLSLPSPHELPSREAQDYQRHYLIINHIGSI
RAEHDDFVIRFSSSMNQLLLLKATDNPDIDWCKEVKGNIYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDIVPSETQEALASFSDYEKVVRYNYSAEERKALVELVGYIKSIGSLMQCN
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKSE
SGSLQQGGDESKGNFFYPRPVAPTAAQAHCLQFLIYEAVSGGNLRKPGGLFGNSGSEIPV
NDLKQLETFFYKLRFFLHILDYSVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPWML
VDYVLESQNAGILESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVSKLCD
SIFTYYKSWAASELLDTSFLFALDNGEKYSVEPMRFTALLKMTRVKLLGRMIDLRSLIAD
RMNKVFRDNIEFLFDRFESQDLCAIVELENLLDILKHAHGLLSRDLSIDSFSIMLNEMQE
NISLVSYCTRLASQIWSEMQNDFLPNFILCNTTQRFTRSSKVPLVPIQKPSVPSAKPNFY
CGTKDLNAAHQSFARLHSGFFGMPHMFSIVRLLGSRSLPWLIRALLDHVSNKIAAVEPMI
TGLQEALPKSIGLLPFDGGVTGCMRLVKEQLSWGTKSQLKSEVLRGIKEIGSVLYWLGLL
DIVLRETDTTHFMQTAPWLGLLPGADGQILHSQDGGESPIVNLFKSATSVIVSNPGCRNP
TSFHTLSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSAVPKTGFIDITTSK
DFYRIYSGLQIWYLEESVRVTPSSHEVLGDSIAWGGCTIIYLLGQQLHFELLDFSYQVLN
VAEVESASISQAHKSPHFVQGWDGLLEVMKKARRLNNHVFSMLKARCPLEDKTACAIKQS
GAPLHRVKFENTVSAFETLPQKEA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgttgaagaagccattgccgctctatccaccttctcactcgaggatgaa
caagcagaggttcaaggaccgggaatttgggtttcgactgatagcggcgcaacggatagt
cccatcgagtatagcgatgtttccgcttatcgcctatcgttgacagaagacacaaaagct
ctcaatcagctgaatgctcttattcaagagggaaaggagatgggatcagtgctttatacg
tatcgcagttgtgtcaaagcacttcctcagcttcctgataatatgaaacaaagtcaagct
gacttgtatctagaaacatatcaagttttggacttggaaatgagccgtttgcgtgaaata
caacgatggcaagcatcagctgccgcaaagctagctgcagatatgcaacggttttctagg
cctgagcgacgcattaatggccccacagtaactcatctctggtccatgttgaagttactt
gacactctggtgcaacttgatcatctcaaaaatgccaaagcaagcataccgaatgatttc
tcttggtataaaaggacattcacacaagtaagtgtacagtggcatgatactgatacgatg
agagaggagctagatgacttacagattttccttagcacaaggtgggctatcttattgaat
ttgcatgtggagatgttccgcgtgaacaatgtagaagacatccttcaagttctcatagtc
tttgctgttgagtcattagagctggattttgcacttttgttcccagagcggcatattctt
ctacgtgttttgccaattcttgttgttttagcaacatcatcggaaaaggatagcgagtct
ttgtacaagagagtgaaaatcaacagactgatcaatatatttaagaatgatccagtaatt
cctgcatttccagatcttcatctttctcctgttgcaatcatgaaagaattgtcaatatac
ttccagaagttttccacccaaactcgtcttcttagtcttccctcacctcatgagcttcca
tcccgtgaggcacaagattatcagagacattatctaatcatcaatcacattggatccatc
cgtgcggagcatgatgactttgtaattcgtttttcttcctccatgaaccagttattgttg
ttgaaggcaacagacaatcctgatattgattggtgcaaagaagtgaagggaaacatatat
gatatggttgttgaaggttttcagctgttgagtagatggactgcacgcatttgggaacaa
tgtgcatggaagttttctcgtccctgcaaggatatagttccttctgaaacacaagaggct
ttagcatcattttctgactatgaaaaggtggtacgatataactatagtgcggaggaaagg
aaagcactggttgaacttgttggttacataaagagcattggatcactgatgcagtgcaac
gacactttggtagctgatgctttatgggagacaattcatgcagaggtccaggattttgtt
cagaatacattggccactatgttgaggactaccttccgaaagaagaaggacctatctagg
atcctttctgatatgcggactctttcagcagactggatggcaaatactagcaagtctgag
tctggatccctacaacaagggggtgatgaaagcaaaggaaactttttttatcctaggccg
gttgcaccaacagctgctcaggctcactgcttgcagttcctgatatatgaggcagtgtct
ggtggtaatcttaggaagcctggaggactctttgggaatagtgggtctgagattcccgtt
aatgatctaaaacagttggaaacattcttttacaagctcagattcttcctgcatatattg
gactactcagtgactgtggcaactttgacggatcttggtttcttgtggtttagagaattt
tatttggaatcttctcgtgttattcagtttcccattgagtgttctctaccctggatgttg
gtggattacgtgctggagtcgcagaatgcgggcatcctagaaagtgtgttgatgccattt
gacatctataatgattcagctcagcaagcactggttttgctcaagcaacggttcctctat
gatgaaattgaggctgaggtggaccattgtttcgatatatttgtttcaaagctttgtgat
agtattttcacttattacaagagctgggcagcaagtgagctacttgatacttcattcctc
ttcgcattggacaatggagaaaaatattctgttgagcctatgaggttcactgccctactg
aagatgacgagagtgaagttgcttgggaggatgattgatttgagaagtttgattgctgac
cggatgaacaaagttttcagagataatattgagtttctatttgaccgttttgagtctcag
gatctatgcgctattgtggaattagaaaatctgttggatatcttaaaacatgcccatggg
ttgctatccagggatctctcaatagactcgttcagtatcatgttgaatgagatgcaagaa
aacatatcacttgtgtcatactgtactagacttgcttcccagatttggtcagagatgcaa
aatgatttcttgccaaacttcatcctttgcaatactacccagcgtttcacccgatcatca
aaggtgcctcttgtacctattcaaaagccatcggttccctctgccaagcctaatttctat
tgtggtactaaagacttaaatgcagctcatcagagttttgcacgcttgcacagtggattt
tttgggatgccccacatgttttcaattgttaggcttctagggtctagatcattgccttgg
ctaattcgagcacttctagatcatgtatcaaacaagatagctgcggtggaaccaatgata
acagggctacaagaagctttgccgaagtctattggattgcttccgtttgatggaggcgtg
acaggttgtatgaggcttgttaaagaacaacttagttggggaaccaaatcacagctcaaa
agcgaagttcttcgagggataaaggagattggaagtgtgttatattggttggggcttctt
gatatcgtgttgagagaaacagatacgacacatttcatgcaaacagccccttggttgggc
ttgcttcctggcgcagatggacaaatactgcattctcaagatggcggagaaagccctatt
gtcaacctcttcaaatcagctacttctgtaattgtgtcaaatcctgggtgccgaaatccg
acttccttccataccttatcaaaacaggcagaagctgcagatctgttgtacaaggctaac
atgaatactggaagtgtgttggaatacgccctagcatttacaagtgcggctctggacaaa
tattgtagcaaatggagtgctgttccaaaaacagggttcatcgacatcacaacgtcaaag
gatttctatcgtatatacagcggtcttcaaatttggtacctagaggagtctgttcgagta
acaccaagcagtcatgaagtgctgggtgattccatagcttggggtggttgcaccataata
tacttgcttgggcaacagctacattttgagctcttggatttttcataccaggtcctcaac
gttgccgaagtggagtctgcatcgatcagccaagcccacaagagtcctcattttgtccag
ggatgggacggtctgttagaagtaatgaagaaagcaaggaggctaaacaatcatgtgttc
agcatgctaaaggcgcgctgcccgctcgaagacaagacggcttgcgctatcaagcaaagc
ggtgcccctctgcatcgggtcaagttcgagaacaccgtctctgcgtttgaaactcttccg
cagaaagaggcctga
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