Pyrus x bretschneideri (Chinese white pear): 108865317
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Entry
108865317 CDS
T03446
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108865317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pxb04040
]
108865317
Ion channels [BR:
pxb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108865317
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
IQ
FdsD
Motif
Other DBs
NCBI-GeneID:
108865317
NCBI-ProteinID:
XP_009352038
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MDYIRGAGETMTAYHEVLGSKRSRLGPQEIRRLNDVYLIFCVIALSLDPLFCYILVFNVQ
KKCLRLDTTLGTPVVVLRFLVDFLYIIHLVFQFRAAIRSLSSQASGRVELFKEMRAIAWR
YLIFYFPVDVFVILPLPQVLIFAIVPKLNASRVLGATKSLNFIVVFQYVLRLLRICSLLK
KVTSNSGILAGTAWVNLFLYMLASHVVGAFWYLFSIERNVSCWSEACQNHTGVHCSLFCD
DTFGARSFPNDSCSTKIPSSTPFNFGIYADALESGVVNDSADFIEKISYCVWWGLQNLSS
LGQGLKTSTYVWEVYYAVFVSLSGLVLLSSLIGNMQTYLQLKTARLADMRSKEEEREYWM
ASYALPPHLKKRIREYQRDQWQENTGVSMENFFLSLPRELRSDTKRHVCLPLLMRVPMFE
KMDKRLFYAMCDRLKPVLYTVATHIVREGDPVDEMLFIMRGRLLAMTIIGGRTGFFNSAY
LGAGDFCGEELLTWALDPHTSVNLPISTKTVQSLSEVEAFALKADDLKFVASQFRRLHSK
QVQRTFRFYSQQWRTWAASFIQAAWRRHMKKKLKESLQEEENRLQDALAKAGVSSPSLGA
TIYASRFAANTLRSGTRKARVPERLPAMLLQKPAEPDFTAEEQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggattatattaggggagctggagaaacaatgaccgcttaccatgaagttttgggttcc
aagaggagtcgtcttggcccgcaggagatccgaaggttgaatgatgtgtatctaattttt
tgtgtaattgcgctctcactggatccgttattctgttatatccttgtttttaatgttcag
aagaagtgccttagattggacacaacactggggactccagtcgttgttttgcggttcctc
gtcgatttcttatatataatccatctggtttttcaattccgtgctgctattcgtagtctt
tcttctcaagcttctggaagagttgagttgtttaaagagatgcgggcaattgcatggaga
tatttgatcttctacttcccggtagacgtatttgtgattcttccactgccacaggtcctc
atttttgctattgttccaaaactaaatgcttcaagggttttgggtgcaacaaaatcattg
aacttcatagttgtctttcaatatgtgctgaggctccttcgcatctgttccttattgaaa
aaagttaccagtaattcgggcatcctcgctggaactgcatgggttaatctctttctatac
atgcttgctagtcatgttgttggagccttttggtacctgttttctatagaaaggaacgta
agttgctggagtgaagcatgtcaaaatcataccggtgtacattgttctttattttgtgat
gacaccttcggagctagatcatttccaaacgactcttgctctacaaagataccaagctcc
acaccttttaattttggaatatacgctgacgcccttgaatctggtgttgtgaacgactca
gcagatttcatagaaaagatttcttactgcgtttggtggggactgcaaaatttgagctcc
ctcggtcaaggcctcaaaacgagtacatatgtttgggaagtctactacgcagttttcgtt
tcactttctgggttggtactgttgtcatctctaattggaaatatgcagacatatttgcag
ttgaaaactgcaagattggcggatatgagatctaaggaggaagagagagaatattggatg
gcctcttatgcacttccccctcatctcaagaagcgtattcgggaataccaaagagaccaa
tggcaagaaaacacaggagtcagcatggagaatttttttctgagtcttcccagggaactc
aggagtgatacaaagcgccatgtctgtttgcctctccttatgagagtgcctatgtttgag
aaaatggataaacgactgttctatgcaatgtgtgaccgtctcaagccggtactatataca
gtggcaactcatattgttcgggagggagacccagtggatgaaatgctcttcattatgcgg
ggcaggctattggctatgaccataattggtggaagaaccggttttttcaactctgcatat
ctcggggccggtgacttttgcggcgaagaacttttgacatgggctcttgatccccacaca
tcagttaatcttccaatctcgaccaaaactgtccaatcccttagtgaagttgaagccttt
gctttaaaagcggatgacttgaagttcgtagcctctcagttcaggcgactccacagcaag
caggtccagcgcacattcaggttctactcacagcagtggaggacttgggcggctagtttt
atacaagcagcgtggcgccgccatatgaagaagaagctaaaagagtctctgcaggaagag
gagaataggctgcaagatgcactggccaaggctggggtcagctccccaagtctaggggcc
accatttatgcctcacgttttgctgctaatactctgcgtagtggtacgcggaaggcaagg
gtgccagagagactaccggccatgctacttcagaagccggcggagcctgattttactgct
gaagagcaataa
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