Providencia xihuensis: ACE2AL_01730
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Entry
ACE2AL_01730 CDS
T10959
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pxh Providencia xihuensis
Pathway
pxh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE2AL_01730 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxh03021
]
ACE2AL_01730 (rpoB)
03400 DNA repair and recombination proteins [BR:
pxh03400
]
ACE2AL_01730 (rpoB)
Enzymes [BR:
pxh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE2AL_01730 (rpoB)
Transcription machinery [BR:
pxh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE2AL_01730 (rpoB)
DNA repair and recombination proteins [BR:
pxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE2AL_01730 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
XGY74529
LinkDB
All DBs
Position
386763..390791
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPDGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLIVYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMDYNTEEILNLFFEKTVFQIRDNKLMMT
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKEEVSNIEVPVEYIAGKVVARD
YIDESTGELICAANMELSLDMLARLSQSGHKTIETLFTNDLDHGAYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLNRDEIEGSGIL
SEEDIIEVMRKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRLVRDGLVT
DEIHYLSAIEEGNFIIAQANTVLGEDGSFIEELVTCRNKGESSLFSREQVEYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVARR
GGSVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCISQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEETQLRDAKKDL
TEELRIFEAGLFARIRSVLVNGGIEADKLDKLPRDRWLELSLADEEKQNQLEQLAEQYDE
LKSEFEKKLDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PVEDMPYDENGNPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKQHEEVAK
LREFIQKAYDLGDDPRQKVDLNTFSDEEVMRLAENLKKGMPIATPVFDGAKEKEIKELLK
LGGLPTSGQITLFDGRTGERFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGSHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggactttggtaaacgtccacaa
gttttggacataccttacctcctttctatccaacttgactcgttccagaagtttatcgag
caagatccagatggccagaatgggctggaagcagctttccgttctgtgtttccaattcag
agctacagcggtaatgctgaacttcaatatgtcagctatcgtttaggcgagcctgttttt
gatgttaaagaatgtcaaattcgcggtgtgacttattctgctcctctacgtgttaaatta
cgcctgatcgtttatgagcgtgaagcaccagaaggcaccgttaaagatatcaaagaacaa
gaagtctacatgggtgaaattccactcatgactgaaaacggaactttcgttatcaacggt
acagagcgtgttatcgtatctcagttacaccgtagtccaggtgtgttcttcgatagcgat
aaaggtaaaacacactcttcaggtaaagtgctctataacgcacgtattatcccttaccgt
ggttcatggcttgatttcgaatttgacccgaaagataacctgtttgtacgtattgaccgt
cgccgtaaattaccagcgaccattattctgcgtgcaatggattacaacaccgaagaaatt
ttaaacctgttcttcgaaaaaactgtattccaaatccgcgataacaaactgatgatgacg
ctggttcctgagcgtctgcgtggtgagactgcttcttttgatatcgaagcgaacggtaaa
gtctatgttgaaaaaggccgccgtatcactgctcgtcatattcgtcagttagaaaaagaa
gaagttagcaacatcgaagtacctgttgaatatatcgcaggtaaagttgttgcaagagac
tacatcgatgaaagtactggtgagctgatttgtgcagcgaacatggaactttctttagac
atgttggcacgtttgagccagtctggtcacaaaacaatcgaaacattgtttaccaatgac
ttagaccacggtgcttacatttctgaaaccgttcgtgtcgacccaactaacgaccgtctg
agtgcattggtagaaatctaccgcatgatgcgtcctggtgagccaccgacccgtgaagca
gcagaaaacctgttcgagaacctgttcttctctgaagatcgttacgacttgtctgctgta
ggtcgtatgaagttcaaccgttcactgaaccgtgatgaaatcgaaggttcaggtatcctg
agcgaagaagacatcatcgaggtgatgcgtaaactcatcgatatccgtaacggtaaaggt
gaagtcgatgatatcgaccacttaggtaaccgtcgtattcgttccgttggtgagatggca
gagaaccaattccgtgttggtctggttcgtgttgagcgtgcagtgaaagagcgtctttct
ctgggtgatcttgatgcattaatgccacaggatatgattaacgctaagcctatttcagcc
gcagttaaagagttctttggttccagccagctgtcacaatttatggaccagaacaatcca
ctgtctgaaattacgcacaaacgtcgtatctctgcattaggcccaggtggtctgactcgt
gagcgcgcgggcttcgaagtacgtgacgtacacccaactcactacggtcgtgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactcattatctgtttatgcacag
accaatgagtacggtttcttagaaaccccataccgtttagttcgtgatggcttagtcact
gatgaaatccactatctgtctgcaattgaggaaggtaacttcatcattgctcaggcgaac
accgtattaggtgaagatggtagctttatcgaagagttagtcacttgtcgtaacaaaggt
gaatcaagcttattcagccgtgaacaggttgaatatatggacgtttcgactcaacaggtt
gtttctgttggtgcgtcactgatcccattccttgaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaagcggttccaactttacgtgctgacaaaccattagtt
ggtacaggtatggaacgtgcagtcgcggttgactcgggtgtaacggctgttgcaagacgt
ggtggttcagttcagtacgttgatgcgtctcgtatcgttatcaaagttaacgaagatgag
atgtatccaggcgaagctggaatcgatatttataacctgactaaatatacccgttctaac
cagaacacctgtattagccagatgccttgtgtatctttaggtgagccagttgagcgtggt
gacgtgttagcagatggtccttcaacagacctcggcgaattagcactgggtcaaaacatg
cgcgtggcattcatgccatggaatggttataacttcgaagactccatcttagtttctgag
cgtgttgttcaagaagaccgtttcacgactattcacattcaggaactgtcttgtgtgtct
cgtgacaccaaattagggcctgaagaaatcactgcggatattccaaacgtcggtgaagct
gcgctttctaaactggatgaatccggtatcgtttatatcggtgcagaagtgaaaggcggc
gacattctggttggtaaagtaacaccgaaaggtgaaactcagttaaccccagaagagaaa
ctgctgcgtgctatcttcggtgaaaaagcgtcagacgttaaagactcttctttacgtgtc
cctaacggtgtttctggtacggttattgacgtacaagtatttacccgtgatggtgtagag
aaagacaaacgtgcattagagatcgaagaaactcagttacgtgatgcgaagaaagactta
acagaagagctacgtattttcgaagctggcctgtttgcccgtatccgttctgtactggtt
aacggcggaattgaagctgacaaactggacaagctgcctcgcgatcgttggttagagtta
tctttagctgatgaagagaagcaaaaccagttagaacaattagctgaacagtacgacgaa
ctgaaatctgagttcgagaaaaaactcgatgcaaaacgtcgtaaaattacccaaggtgat
gatctggcacctggcgtactgaaaattgttaaggtttatctggctgttaaacgtcagatt
caaccgggtgataaaatggcgggtcgccatggtaacaaaggtgttatctcaaaaatcaac
ccagttgaagacatgccttacgatgaaaacggtaacccagttgacatcgttctgaaccca
ctgggcgtaccatcacgtatgaacatcggtcagattttggaaacccacttggggatggca
gcaaaaggtattggtgagaaaatcaatgctatgcttaaacagcatgaagaagttgccaaa
ctgcgtgaatttatccaaaaagcgtacgatttaggtgatgatccacgccagaaagttgac
ttgaacactttctctgacgaagaagtgatgcgtttggctgagaacctgaaaaaaggtatg
ccaattgcgacaccagtgtttgatggtgcgaaagagaaagaaatcaaagaactactgaaa
ctgggcggtctgccaacttcaggtcagattacattattcgatggtcgtactggcgagcgt
ttcgagcgtcaagttactgtcggttacatgtacatgctgaaactgaaccacttggttgac
gataagatgcacgcccgttcaacaggttcttacagcttggttactcagcaaccgctgggt
ggtaaagcgcagttcggtggtcagcgtttcggggagatggaagtgtgggcactggaagca
tacggtgcagcctatactcttcaagaaatgcttacagttaaatcggatgacgttaacggc
cgtacgaagatgtataaaaacatcgtcgatggcagccatcagatggaacctggcatgccg
gaatctttcaacgtattgctgaaagaaatccgctcactgggtatcaacatcgagctggaa
gacgagtaa
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