Providencia xihuensis: ACE2AL_02405
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Entry
ACE2AL_02405 CDS
T10959
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pxh Providencia xihuensis
Brite
KEGG Orthology (KO) [BR:
pxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxh03016
]
ACE2AL_02405
Enzymes [BR:
pxh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACE2AL_02405
Transfer RNA biogenesis [BR:
pxh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACE2AL_02405
Prokaryotic type
tRNA splicing ligases
ACE2AL_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
XGY74653
LinkDB
All DBs
Position
complement(557733..558959)
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AA seq
408 aa
AA seq
DB search
MSHNNFNQLIQETGVPVKMWTNGVPVDPKAVTQLQNTAKMPFIFKHLAVMPDVHVGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLTASDLPDSLQNIRFAIEAAVPHGRTTHRH
GRDKGAWHRTPDIVDTHWAHLDEDFKRICDKYPKLRGTNHYNHLGTLGTGNHFIELCLDE
QNRVWVMLHSGSRGVGNAIGNLFISLAQKDMQQHIANLPDRDLAYFEEGSVHFNDYMEAV
GWAQDFARHNREVMMHRVLEALSREIPKPFTTQQEAVNCHHNYVQKEQHFGEEILVTRKG
AVSARKGQMGIIPGSMGAKSFIVRGLGDEESFCSCSHGAGRVMSRTEAKKRFSVSDQKMA
TAHVECRKDSDVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataataatttcaatcaattaattcaagaaactggcgtacctgtaaaaatgtgg
actaacggcgttcctgttgatccgaaagcggtaacacaattgcaaaataccgccaagatg
ccctttatttttaaacacttagcagtaatgccagatgtacacgtagggaaaggatcaacc
atcgggagtgtgatcccaaccaaaggggcgattatccctgccgcagtgggagtcgatatc
ggttgtggaatgattgcagtgcgtacatccctaaccgcgtctgatttgcctgatagctta
cagaatattcgttttgctatcgaagccgctgtgccgcacggacgaacgactcatcgacac
ggacgtgataaaggcgcatggcaccgtacaccagatattgtggatacccattgggcgcat
ttggatgaggactttaaacgtatttgcgataagtacccaaaactacgtgggactaaccat
tataaccacttaggaacgctgggaacggggaaccactttattgaactgtgtttggatgag
caaaatcgtgtatgggtgatgttacatagcgggtcacgcggagtaggaaatgcgataggt
aacctattcatttcattggcacaaaaggatatgcagcaacatatcgctaatttgccagat
agggatttagcgtactttgaagaaggcagcgtgcattttaatgactatatggaagccgtg
ggttgggcgcaggatttcgcccgccataaccgcgaagtgatgatgcaccgtgtgttggaa
gcactttcacgtgaaattccaaaaccgtttaccacccaacaagaagcggtaaattgccac
cataattatgtgcaaaaagagcaacattttggtgaagaaattttggtgacacgaaaaggc
gcagtgtctgctcgaaaaggccaaatggggatcattccagggtcaatgggagcgaaaagc
tttattgtgcgcggacttggcgatgaagaaagtttttgctcttgcagtcacggtgcaggc
cgtgtgatgagccgaactgaggctaaaaagcgtttttcagtcagcgaccaaaaaatggca
actgcgcacgttgagtgccgaaaagatagcgatgtgattgatgaaattccaatggcatat
aaagacattgatgccgtaatggcagcgcaatcatcattagttgaaatcgtgcatacccta
cgccaagtggtgtgtgtgaaaggttaa
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