Providencia xihuensis: ACE2AL_19040
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Entry
ACE2AL_19040 CDS
T10959
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pxh Providencia xihuensis
Pathway
pxh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE2AL_19040 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxh03019
]
ACE2AL_19040 (recQ)
03400 DNA repair and recombination proteins [BR:
pxh03400
]
ACE2AL_19040 (recQ)
Enzymes [BR:
pxh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE2AL_19040 (recQ)
Messenger RNA biogenesis [BR:
pxh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE2AL_19040 (recQ)
DNA repair and recombination proteins [BR:
pxh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACE2AL_19040 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
SecA_DEAD
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XGY73967
LinkDB
All DBs
Position
complement(4188266..4190092)
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AA seq
608 aa
AA seq
DB search
MSTACVINQLSLAENVLNSTFGYQSFRPGQDAVIGAILDNRDCLVLMPTGGGKSLCYQVP
ALVKQGVTLVVSPLISLMKDQVDQLRLHGVNAACLNSSQTPLEQRQIMELCSSGEIKLLY
VAPERLLTDYFLNQLSSWDITLLAVDEAHCISQWGHDFRPEYRALGQLRQALPNVPVMAL
TATADETTRTDIIRLLELHDPLVHISSFDRPNIRYTLVEKYKPLDQLWFFIKGQKGKAGI
VYCNSRSKVEETAERLQKRGLSVAAYHAGLDSQQREWVQDAFLKDNLQIVVATVAFGMGI
NKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADMAWLRRCLEEKPAGMQ
QDIERHKLNAIAAFAEAQTCRRLVLLNYFGENRQQPCGNCDICLDPPKQYDGLIDAQKAL
SCIYRVGQRFGIGYIVEVLRGANNQRIRDLGHDKLPVYGIGKEQSNEHWISVIRQLIHLG
MITQNITHFSALQLTEAARPILRGESALQLAVPRVLVTKSRNQQNKVYHGNYDKKLFAKL
RKLRKSIADEDNIPPFVVFNDATLIEMAEHVPTTSAELLLINGVGERKLERFGESFMTLI
RDHLEGYE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactgcttgtgtcattaaccaactttcactggctgaaaacgtgcttaatagcacg
tttggttatcagtcatttcgtccaggccaagatgcggtcatcggtgctattttagataac
cgtgattgtttagtattaatgccaacgggtggtggaaagtccttgtgttatcaagtccct
gcgcttgtaaagcaaggcgtgacgttggtggtttcaccgcttatttccttgatgaaagat
caggttgaccaactacgtttgcatggtgtgaatgcggcctgtttaaactcatctcaaact
ccgttagaacagcgtcaaatcatggagttatgcagcagtggtgagatcaaattgttgtat
gttgcccctgagcggctattaactgattattttctcaatcagctttcaagctgggacatc
acgttattagcggtggatgaagctcactgcatttctcaatggggacatgattttcggcct
gaatatcgtgcattagggcagttgcgccaagcgttacccaatgtgcctgttatggcacta
accgcaacggccgatgaaaccacacgaaccgatattatccgcttattggaactccatgat
ccactcgttcatatcagtagttttgataggccgaatatccgttacactttggtcgaaaaa
tataagcctttagatcagctttggtttttcattaaaggccaaaaaggcaaagcaggtatt
gtttattgtaatagccgtagcaaagtggaagaaaccgcggaacgtttgcaaaaacgtgga
ttaagtgttgcagcttaccatgcagggttagatagccaacagcgtgagtgggtacaggat
gcatttttaaaagataatttacagattgtcgttgcgacagttgcatttggtatggggata
aacaaatcaaatgtccgttttgtggcccactttgatatcccacgtaatatcgaggcttac
taccaagagactgggcgagcagggcgcgatggtgttgaagctgaagctgtcttattttat
gaccctgcggatatggcgtggctgcgtcgttgtcttgaagaaaaacccgcaggcatgcaa
caggatattgaacggcacaaacttaatgccattgctgccttcgctgaagcgcaaacttgt
cgtcgcttagttctacttaactactttggcgaaaaccgtcagcagccttgtggtaactgt
gatatttgtttagacccaccaaagcaatacgatgggttaattgatgctcaaaaagcactt
tcttgcatttatcgtgttggtcagcgctttggtatcggctatattgttgaagtattgcgc
ggggcaaataaccaacgcattcgtgatttaggccatgataaattacctgtttatggtatc
ggcaaagagcaaagcaatgaacattggataagtgtgatccgtcaattgatccacttaggg
atgatcactcaaaacattactcatttttccgcgctgcagttaacggaagcggcaaggccc
attttacgcggggaatctgcgttacagcttgccgtaccacgggttttagtcacaaaaagc
cgtaatcagcaaaacaaagtttaccatggcaactatgataagaagctgtttgccaaactg
cgaaaattacgtaagtcgatagcagatgaggacaatatcccgccatttgtagtatttaac
gatgctacattaatcgaaatggcagaacatgttccgacaacttccgcagaattgttgcta
attaatggtgttggtgaacgcaaactggagcgttttggcgagtcgtttatgactctcatc
cgagaccaccttgaaggttatgaatga
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