Providencia xihuensis: ACE2AL_19250
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Entry
ACE2AL_19250 CDS
T10959
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pxh Providencia xihuensis
Pathway
pxh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE2AL_19250 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxh03021
]
ACE2AL_19250 (rho)
03019 Messenger RNA biogenesis [BR:
pxh03019
]
ACE2AL_19250 (rho)
Transcription machinery [BR:
pxh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACE2AL_19250 (rho)
Messenger RNA biogenesis [BR:
pxh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACE2AL_19250 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
XGY74003
LinkDB
All DBs
Position
complement(4232588..4233847)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLISKLAMAKTNEEFFDFMKRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtatcagaattgattacgttaggcgaaaat
atggggctagagaacttagcccgtatgagaaagcaggatattattttttccattttgaag
cagcatgcgaaaagtggtgaagatattttcggcgatggcgtactggaaatattgcaggat
ggatttggtttcctccgttccgcagacagttcttacctcgcaggtcccgatgatatctat
gtttctcctagccaaatccgccgttttaacctacgtacaggtgacaccatttcaggaaaa
attcgacctcctaaagaaggcgaacgttattttgctctcctgaaagtcaatgaagttaac
ttcgacaaacctgaaaacgcacgtagtaaaatccttttcgaaaacttaacaccattacat
gcaaatagtcgtcttcgcatggaacgtggtaacggttcaacagaagatttaacggcgcga
gttttagacttagctgcaccaattggccgtggtcaacgtgggctgattgttgctccgcca
aaagcaggtaaaacgatgttgctgcaaaatattgccgctaacattgcacacaattatcca
gattgcgttctgatggttctgttgatcgatgagcgtcctgaagaagtaacagaaatgcag
cgcttagttaaaggtgaagttatcgcttctacttttgatgagccagctgcgcgtcacgtt
caagtggctgaaatggttatcgagaaagcaaaacgtctggttgaacataaaaaagacgtc
attatcttactcgactccattacacgtcttgctcgtgcgtataacaccgtggttccttca
tctggtaaagttttaacaggtggtgtggacgcaaacgccttacatcgtcctaaacgtttc
ttcggtgctgcccgtaatgtcgaagaaggtggaagcctgacaatcattgcaactgcactg
gttgatacaggttcgaaaatggatgaagttatttacgaggagtttaaaggtacaggtaat
atggaactgcacctttctcgtaaaattgcggaaaaacgtgtattcccagcgattgattac
aatcgttctggtacgcgtaaagaagaattacttacttcacaagacgaactgcaaaaaatg
tggatcctacgtaaaattattcatccaatgggtgagattgatgcgatggaattcctcatt
agtaagctcgcaatggcaaaaactaacgaagagttctttgattttatgaagagagcttag
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