Pseudoalteromonas xiamenensis: J5O05_00830
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Entry
J5O05_00830 CDS
T07215
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxi03032
]
J5O05_00830 (ihfB)
03036 Chromosome and associated proteins [BR:
pxi03036
]
J5O05_00830 (ihfB)
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_00830 (ihfB)
DNA replication proteins [BR:
pxi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J5O05_00830 (ihfB)
Chromosome and associated proteins [BR:
pxi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J5O05_00830 (ihfB)
DNA repair and recombination proteins [BR:
pxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J5O05_00830 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
UPF0181
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
QTH71560
UniProt:
A0A975HMW5
LinkDB
All DBs
Position
140752..141042
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AA seq
96 aa
AA seq
DB search
MTKSELIEQLAQQHAHVPMKDVENAVKEILELMAGSLSASERIEIRGFGSFSLHYRAPRT
GRNPKTGDTVELDGKHVPHFKPGKELRDRVNESISG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaactgatagaacaattagcacaacagcatgcccatgtacctatgaaa
gacgtggaaaatgcagtaaaagagattcttgagctaatggcagggtcattgtctgcttca
gagcgtatagagattcgtggttttggtagtttttctctacactaccgtgcaccaagaaca
ggtcgtaacccaaagacgggcgatacagttgaattagatggtaaacacgtaccacatttc
aaaccaggtaaagagcttcgtgatcgtgtaaacgaaagcatcagtggttaa
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