Pseudoalteromonas xiamenensis: J5O05_01350
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Entry
J5O05_01350 CDS
T07215
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J5O05_01350 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pxi01007
]
J5O05_01350 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxi03016
]
J5O05_01350 (serS)
Enzymes [BR:
pxi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
J5O05_01350 (serS)
Amino acid related enzymes [BR:
pxi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
J5O05_01350 (serS)
Transfer RNA biogenesis [BR:
pxi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J5O05_01350 (serS)
Prokaryotic type
J5O05_01350 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
CCDC28
BORCS6
DUF4110
DUF3450
Motif
Other DBs
NCBI-ProteinID:
QTH71647
UniProt:
A0A975DI98
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All DBs
Position
252175..253467
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AA seq
430 aa
AA seq
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MLDSRFLRQDIAEAQEKLAKRGFELDVVAINELEEKRKALQTRTQELQSERNSRSKAIGQ
AKAKGEDVQPLLDAVAHLGDELDAAKTEQDKILKQLEDISATLPNLPADDVPVGKDESEN
VEVLKWGEPRQFDFEVKDHVDIGEGLNKGLDFETGVKLSGARFSVMRAGVARMHRALVQF
MLDTHTQENGYTEMYVPYLVNKDSLFGTGQLPKFAEDLFHTKALSEDEDGFSLIPTAEVP
LTNTARDVIFNEQELPLKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDS
MAALEELTGHAEQILQALELPYRKVVLCTGDMGFGATKTYDLEVWLPAQNTYREISSCSN
MWDFQARRMQARFRRQSEKKPELLHTLNGSGLAVGRTLVAILENYQQADGSVIVPTVLRP
YMNGLEVLSK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttagattcaagatttttaagacaagacattgctgaagcacaagaaaaattggctaaa
cgcggttttgaacttgatgtagttgcaattaacgaactagaagaaaagcgcaaagcacta
caaacacgcacgcaagaattgcaaagtgagagaaactcccgctccaaagcgataggtcaa
gccaaagcaaaaggtgaagatgttcaaccattattggacgcagtagcacacttaggtgat
gaacttgatgcggctaagactgagcaagataaaattcttaagcaacttgaagatatttct
gcgacgttaccaaacttgcctgctgatgatgtaccagtaggtaaagacgaaagtgaaaac
gtcgaagtgttaaaatggggcgaaccacgccagtttgactttgaagtgaaagatcacgtt
gatatcggtgaaggcctaaataaaggacttgatttcgagacaggcgtgaaactaagtggt
gctcgtttttcagttatgcgtgcaggtgttgcacgtatgcaccgtgcgcttgttcaattt
atgcttgatacacacacacaggaaaatggttacacggaaatgtatgttccataccttgtg
aataaagacagcttatttggaacaggtcagttaccaaagtttgcagaagacctattccac
acaaaagcgttatctgaagatgaagacggttttagcttgatcccaaccgcggaagtgcca
ttaacaaatacagcgcgagacgtaatttttaacgagcaagagctaccacttaaattaacg
gctcacacaccgtgtttccgtagcgaagcgggtagttatggacgagatacacgtggccta
attcgtcaacatcaatttgacaaagtagaacttgtgcagttggttaaacctgaagattca
atggctgcacttgaagagcttacaggtcacgctgagcaaattcttcaagccttagagctt
ccataccgtaaagtcgttttgtgtactggagacatgggttttggcgcaactaaaacatac
gatttagaagtttggttaccagcacaaaacacctaccgtgaaatttcatcgtgttctaac
atgtgggatttccaagctcgacgtatgcaagcacgcttccgtcgtcaaagcgaaaagaaa
ccagaattacttcacacattgaatggttcgggactcgctgtgggccgtacacttgttgct
attttagaaaactaccagcaggcagacggttcagttatcgtacctacggtacttcgacct
tacatgaacgggcttgaagtgttatcaaaataa
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