Pseudoalteromonas xiamenensis: J5O05_01735
Help
Entry
J5O05_01735 CDS
T07215
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxi03009
]
J5O05_01735 (dbpA)
Enzymes [BR:
pxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J5O05_01735 (dbpA)
Ribosome biogenesis [BR:
pxi03009
]
Prokaryotic type
rRNA helicases
J5O05_01735 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
PRAI
Motif
Other DBs
NCBI-ProteinID:
QTH71709
UniProt:
A0A975HL64
LinkDB
All DBs
Position
332324..333712
Genome browser
AA seq
462 aa
AA seq
DB search
MSKSLFSETPLSTAILENLSSLGYETMTDIQAQTLPLILDGKDVIGQGKTGSGKTAAFSL
GILHNLNVDRFRVQAIVVCPTRELADQVAVEIRKLARAIHNIKVLTLCGGAPMGPQIGSL
EHGAHIVVGTPGRIEEHLVKGRLSLDEVNTFVLDEADRMLEMGFEDSIQCIVEHCPAQRQ
NLLFSATYPQGIEKLCQHIMKAPEKVVVESKHDANSIEQYFYEVESNEERIDAVHRLLLQ
HQPSSAVVFCNTKAECQTVSDHLMKLGFDVAALHGDLEQKDRDRTLVRFANKSITILLAT
DVAARGIDVDHVDMVINYHIAHDPEVHVHRIGRTGRAGNKGVACSIMSYKESHKVNTLED
YLDFTIEPSDLPKDDVFSNSVMKAPMITLQIDGGKKAKLRPGDILGALTADGKLTGTQIG
KIKVTAMTSFVAVERKVANIALQIMGDGKMKGRSFRTRKVLN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaagtcattgttctcagaaacgcctctatccactgcaattttagaaaacctctcg
tcgcttggttatgaaaccatgacggacattcaagcgcagactttaccattgatattggat
ggaaaagatgtcattgggcaaggtaaaacgggatctggtaaaacagccgcattttcatta
gggatcttgcacaatctcaatgtagaccgcttcagggttcaagcgattgttgtctgccct
actcgtgaactggccgatcaagttgctgttgagattcgcaagctcgcgcgtgcgattcac
aatattaaagtcctcactttatgcggtggtgctccgatggggcctcagattggttcacta
gaacatggcgcacatatcgttgttggtacaccgggacgtattgaagaacatctggtaaag
ggacgtctttcgctagatgaagtcaatactttcgtgctagacgaagccgatcgtatgctg
gaaatgggatttgaagactcaatacaatgcattgttgagcattgccctgcacaacgtcaa
aatttgttattcagtgcaacctaccctcaaggtatcgaaaagctttgccagcacataatg
aaagcgcctgaaaaagtggttgttgagtcaaagcatgatgccaactcaattgaacagtat
ttctacgaggttgaatctaacgaggagcgtattgatgcagttcaccgacttctgctccaa
catcaacctagtagcgcggttgtattctgtaatacaaaagctgaatgtcaaaccgtgagt
gaccatttaatgaagcttggcttcgacgtagcggcacttcatggtgatttagaacaaaaa
gaccgcgaccgcactttagttcgttttgccaacaaaagtattaccatattactagctacc
gacgttgccgcacgaggcatagatgttgaccacgttgacatggtcataaactatcatatc
gcgcatgacccagaagtacacgttcatcgaattggcagaacaggacgcgctggtaataaa
ggtgttgcgtgttccatcatgagttataaggaatcgcacaaagtgaatacgctagaagac
tatctcgattttaccattgagccgagtgacttgcctaaagacgacgtgttcagcaacagc
gtcatgaaagcaccgatgatcacacttcaaatcgatggtggtaaaaaagcgaagctccgt
cctggcgatattcttggcgcgttaactgcggacgggaagttaacagggactcaaattggc
aaaattaaagtaacagccatgacttctttcgtcgcagtagagcgaaaggtcgcaaacatt
gccctacaaattatgggcgatggcaaaatgaaaggcagaagctttagaactcgtaaagtt
ctgaattaa
DBGET
integrated database retrieval system
