Pseudoalteromonas xiamenensis: J5O05_04125
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Entry
J5O05_04125 CDS
T07215
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03030
DNA replication
pxi03430
Mismatch repair
pxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5O05_04125 (holA)
03430 Mismatch repair
J5O05_04125 (holA)
03440 Homologous recombination
J5O05_04125 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxi03032
]
J5O05_04125 (holA)
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_04125 (holA)
Enzymes [BR:
pxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5O05_04125 (holA)
DNA replication proteins [BR:
pxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5O05_04125 (holA)
DNA repair and recombination proteins [BR:
pxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5O05_04125 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QTH72088
UniProt:
A0A975DHS1
LinkDB
All DBs
Position
842530..843573
Genome browser
AA seq
347 aa
AA seq
DB search
MRFYANQLAQALKKDLLPFYMVFGEEPYQEQQCVDAIRVRARQLGFDEIIKFTNLPGFDW
QTVVAQYQSMSLFSARTLIELDLAQTKPGTNGAAILKSFAESPNPDMVIVLKNLSAGQDV
QRSSWFKALDKLGAFVPCYPLTGTHLKRWIDEQCHKLKLNMTGLAKSALLESTEGNLLAC
HQELEKLSLLFGEANIDDHTLQQGLLNQAKFNIFDLGSALLHGNSPQICKVMEKLMSDNI
EPMSIVWALQKDAQLLLELYKGQQNGVPWATLCKSHNVWKNQEASVQQALSRLNMSVVQQ
IQLNLARFDDAFKHQLVAAPYQALLHIALQFARPIPFDLPISLEENV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttacgcgaatcaattagcccaagcgctaaaaaaagaccttctgccattttac
atggtatttggagaagaaccgtatcaagaacaacaatgtgttgatgcaatacgagttcgt
gctcgacaactcggctttgatgaaatcatcaaatttaccaatttacctggatttgattgg
caaaccgtcgtcgcacaatatcaaagtatgtccctcttcagcgcccgcacactcattgaa
ctcgatttagctcaaactaaaccaggcacaaacggtgcagcaattttaaagtcttttgca
gaatcccctaatccagacatggttattgtgcttaagaacttaagcgcaggtcaagacgtt
cagcgctccagttggtttaaggctctcgataagctgggcgcgttcgtaccctgctatccg
ttgacaggcactcacttaaaacgctggatagatgagcaatgccacaagttaaagttgaac
atgactggtttggcaaaaagtgcgctgctggagtcaacagaaggaaacttacttgcgtgc
caccaagagctggaaaaactctccttactgtttggcgaggccaatattgacgatcacact
ttacaacaggggttgttaaaccaagcgaagttcaacatcttcgacttgggaagcgcgcta
ttgcatggtaacagcccgcagatttgtaaagtgatggaaaaactcatgtcggacaatatt
gaaccgatgagtattgtgtgggcgttgcaaaaagacgcgcaattgctgttagagttgtat
aaaggccaacaaaatggggtgccatgggccacattatgcaaatcccataatgtttggaaa
aatcaagaagcgtccgttcaacaagccttatcaagacttaacatgagcgttgtgcaacaa
attcagttgaatttagctcgctttgatgacgcctttaaacatcaacttgtagccgcacct
taccaagctctgctgcacattgcactgcaattcgcccgtcctatcccatttgaccttcca
atatcattggaggaaaacgtgtga
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