Pseudoalteromonas xiamenensis: J5O05_04240
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Entry
J5O05_04240 CDS
T07215
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxi03016
]
J5O05_04240 (truB)
Enzymes [BR:
pxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J5O05_04240 (truB)
Transfer RNA biogenesis [BR:
pxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5O05_04240 (truB)
Prokaryotic type
J5O05_04240 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6357
Motif
Other DBs
NCBI-ProteinID:
QTH72108
UniProt:
A0A975DHY4
LinkDB
All DBs
Position
complement(866499..867443)
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AA seq
314 aa
AA seq
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MARRNKGRPIDGILLLNKAQGISSNKALQQAKFLFGAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRPVNITRAQLEQEVTSFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRRITVFSISLDEYDEQAQEIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMISFEALEALVQSVAQDETARFALLDP
LLLPMDTALADLPMVEINAEQGKAFGHGQVVKLESGEVPEGIVKVMADGRFIGLGERNPH
GHLKAKRALSSTQE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgcaataaaggaaggccgattgacggcatcttattattaaacaaagcgcag
ggcatctcgtcaaataaagcacttcaacaagctaagtttttgttcggtgcacaaaaagct
ggacatacaggggcgctagatccgcttgcgactggtatgctccccatctgttttggtgaa
gcgactaaattcacgcagtttttgctcgatacggacaaaacgtatgtggttcgcgccaaa
ttaggtgagcgtacgacaacatcagattctgatggtgaagtagttgaaactcgccctgtt
aacattacgcgtgcgcagcttgaacaggaggttacaagcttcttgggcgagtctgaccaa
tatccttcaatgtattctgcattaaagtaccaaggtcaaccgctttataaatatgcgcgt
gagggaatagaggttcctagaaaatgtcgtcgtattactgtctttagtatttcactggat
gaatatgatgaacaagcgcaggaaattcaaatgactgtgcatgtttcaaaaggcacgtat
attcgcactattgttgatgatttgggtgaaaaacttggctgtggtgcgcacgtcattatg
ctccatcgcagtgaagtaggtcattacccaagtgataaaatgataagctttgaggcactt
gaagccttggttcaatcagttgcacaagacgaaacagctcgatttgcgttgcttgatccg
ttgcttttacctatggatacggcgcttgctgatttaccgatggtagagattaacgcggag
caaggcaaagcgtttggccacggacaagtggttaaattagaaagcggcgaagtacctgaa
ggcattgttaaagtaatggcggatggacgctttattggtcttggtgaacgtaaccctcat
gggcatttaaaagcgaaacgcgctttgtcgagcacacaagaataa
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