Pseudoalteromonas xiamenensis: J5O05_07205
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Entry
J5O05_07205 CDS
T07215
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi00521
Streptomycin biosynthesis
pxi00523
Polyketide sugar unit biosynthesis
pxi00525
Acarbose and validamycin biosynthesis
pxi00541
Biosynthesis of various nucleotide sugars
pxi01100
Metabolic pathways
pxi01110
Biosynthesis of secondary metabolites
pxi01250
Biosynthesis of nucleotide sugars
Module
pxi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J5O05_07205 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J5O05_07205 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J5O05_07205 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J5O05_07205 (rfbB)
00525 Acarbose and validamycin biosynthesis
J5O05_07205 (rfbB)
Enzymes [BR:
pxi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J5O05_07205 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
KR
DCTN5
Motif
Other DBs
NCBI-ProteinID:
QTH72579
UniProt:
A0A975HM00
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Position
complement(1479472..1480530)
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AA seq
352 aa
AA seq
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MQQLRFLVTGGAGFIGSALVRFLINRTNSVVLNIDKLTYAASLSSLESVSASSRYSFVHA
DICDHQKMVELFNDFRPDKIIHLAAESHVDRSIGGPGAFIQTNVVGTFTLLEAARQYFCS
LSQTQQAGFRFHHVSTDEVYGDLSEADLPFTETHRYEPSSPYSASKAASDHLVHAWSRTY
KLPCSISHCSNNYGPFHFPEKLIPLTIISALQNKSIPVFGDGLQIRDWLFVEDHVEAIYD
IVIQGKVGETYNIGGNCERTNLAVVTSICEILDRLQPSKTVVSYKELIQFVTDRAGHDRR
YAIDVSKLTNELNWYSSVTFEEGLERTVSWFIDNKNWWQNISATERLGVVRN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaattaaggtttctggttactggtggggctggttttattggctctgctttggtt
cgttttttaataaacagaacaaactcagttgttttgaatatcgacaagttaacctatgca
gcaagtttgtcctcccttgaatctgtttcagccagttcacgttattcatttgtccatgcg
gatatttgtgatcatcaaaagatggttgagttattcaacgattttaggcccgataaaatc
attcaccttgcagcagaaagtcatgttgatcgatctattggtggaccaggtgcttttatc
caaacaaatgtcgtcggaactttcacgctgcttgaagccgctagacaatatttttgttct
ttgtctcagactcaacaagctggttttcgtttccatcatgtctcaaccgacgaagtttac
ggtgatttgtctgaagccgatttaccgtttacagagactcaccgatatgagccaagttca
ccttattctgcttctaaagcagcaagtgaccatttagttcacgcatggagcagaacgtac
aaactaccttgttctattagtcattgctccaataattatggaccattccattttcctgaa
aagcttattcctctaactattattagtgcgttgcaaaacaaatctatccctgtatttggt
gatggtttgcagatccgagattggttgtttgttgaagatcatgttgaagcaatttatgac
attgtcattcaagggaaagtcggagaaacctataatattggcggaaattgcgagcgaact
aatttggccgtcgttacttctatttgcgaaattttagataggcttcagccaagtaaaaca
gttgtttcttataaagagcttatccaatttgttaccgacagagcaggacatgatcgccgt
tacgccattgatgtttcaaagctgacaaatgagcttaattggtactcaagcgtaacgttc
gaagaaggtttagaacggactgtaagctggttcatagataacaaaaactggtggcaaaat
attagtgctacagaacgtcttggggtggtgaggaattga
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