KEGG   Pseudoalteromonas xiamenensis: J5O05_09145
Entry
J5O05_09145       CDS       T07215                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pxi  Pseudoalteromonas xiamenensis
Pathway
pxi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J5O05_09145 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxi03019]
    J5O05_09145 (rhlB)
Enzymes [BR:pxi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     J5O05_09145 (rhlB)
Messenger RNA biogenesis [BR:pxi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     J5O05_09145 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: QTH70211
UniProt: A0A975HJQ0
LinkDB
Position
complement(1886053..1887321)
AA seq 422 aa
MTKTHLTNKKFSDFALAPEVVAGLTENGFEYCTPIQAKCLPFVCEGRDIAGQAQTGTGKT
LAFLTATCHRLMQTEGKSRKHPRALIMAPTRELAIQIHKDAKIIAPQCNLKLGLVYGGED
YEKQRAQFENGVDILIGTTGRLIDFYKQGAFSLNEIEVVVLDEADRMFDLGFIKDIRYLF
NRMPERSERMNLLFSATLSYRVQELAFEHMHNPIHVQVEPEVKTAKRIKEELFHPSQEDK
TKLLLTLIEEEWPEKAIVFANTKQVCEDVYAWLKADGHRVGLLTGDVNQKKRISILAQFA
KGDLDLLVATDVAARGLHIPEVSHVFNFDLPDDCEDYVHRIGRTGRAGASGHAISFACEQ
YAYNLHDIETYIDHAIPLSHYDKEALLDDIKTPDLQRKRNYSQGPRQRTGRRQNSYQKPR
SS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgactaagacacatttgaccaataaaaaattttctgactttgctttagcaccggaagtg
gtcgccggattaactgagaatggcttcgaatattgtacgccaatccaagcaaagtgttta
ccttttgtctgtgaagggcgtgacatcgcaggtcaagctcaaactgggacgggcaagact
ttggcttttttaacagccacttgtcatcgtcttatgcaaacagaaggcaagtccagaaag
cacccaagagccctgatcatggcccccactcgggagttagcgattcagatccataaagat
gcaaaaatcattgcgccgcaatgcaaccttaaacttggtttagtatatggtggcgaagat
tacgaaaaacaacgtgctcaatttgaaaatggtgtagatattttaattggcacaacaggg
cgactcatcgatttctacaaacaaggcgcgtttagcttaaatgaaatcgaggtagtcgta
ctagatgaagctgaccgcatgtttgatttagggttcatcaaggatattcgttatttgttt
aaccgcatgcctgagcgcagtgagcgaatgaatctgttgttttctgcaacactttcttac
cgtgtgcaggaacttgcctttgaacacatgcataacccaattcacgttcaagtcgagcca
gaagtaaaaacagcaaagcgcataaaagaagaacttttccatccttctcaagaagataaa
accaaactattgttaacgctaattgaagaagagtggcctgaaaaagcgattgtttttgct
aatacaaaacaggtttgtgaagacgtttatgcttggcttaaggcggatggacatcgagtt
ggtttgttaactggtgatgtgaatcaaaagaagcgaatttcaattctggcacaatttgct
aaaggtgatttagaccttttagttgcaacagacgttgcggcacgtggtttacatattcct
gaagtgagtcatgtattcaattttgacttacctgacgattgtgaagattacgttcatcgt
atcggtcgtacaggtcgcgctggtgcgtctgggcatgcaattagttttgcgtgtgagcaa
tacgcttacaatctgcatgacattgaaacatacatcgatcacgccatcccgttgtcgcac
tacgacaaagaagcgttgctcgatgatattaaaacacctgatttacagagaaaacggaac
tattcacaaggaccacgtcagcgtactggacgtcgccaaaatagttaccaaaaaccgcgc
tcatcgtga

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